Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 MTHFD2P5-201ENST00000320415 844 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RNU5B-1-201ENST00000363286 116 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RPL9P21-201ENST00000392269 505 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC019178.1-201ENST00000392337 440 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AL033519.1-201ENST00000407266 307 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 VN1R21P-201ENST00000426703 765 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 NPM1P23-201ENST00000440193 849 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 E2F6P3-201ENST00000441743 743 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 GAPDHP20-201ENST00000444107 1007 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 DEFA11P-201ENST00000446470 261 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RPS4XP6-201ENST00000477670 797 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RN7SL259P-201ENST00000478499 253 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 SYT14P1-201ENST00000481459 721 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RN7SL382P-201ENST00000482631 282 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RPS27AP16-201ENST00000492222 470 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC091951.3-201ENST00000504093 246 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AP006587.5-201ENST00000532033 739 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC010463.3-201ENST00000594077 500 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC124856.1-201ENST00000600819 896 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AL590032.1-201ENST00000604920 252 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 RMST_10.1-201ENST00000616309 154 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AP003789.1-201ENST00000617737 605 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 MIR6849-201ENST00000618543 69 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC007603.3-201ENST00000636915 979 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 MKI67P1-201ENST00000604297 1460 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 MAPK10-270ENST00000641102 3538 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RNA5SP65-201ENST00000363166 119 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 SNORA7A-201ENST00000384765 139 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 SNORD94-201ENST00000386037 137 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RNA5SP474-201ENST00000391234 90 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AL021331.1-201ENST00000402817 582 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AL031779.1-201ENST00000415663 330 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 CDC42P6-201ENST00000421246 576 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 GTF2IP3-201ENST00000433887 494 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 KCTD10P1-201ENST00000434203 625 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms