Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 RN7SKP151-201ENST00000410230 316 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AL450345.1-202ENST00000605741 3881 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 RN7SL447P-201ENST00000494711 245 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AC060766.1-201ENST00000590824 627 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AP000346.3-201ENST00000622821 210 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 SNORA67-201ENST00000384423 137 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 KCTD9P4-201ENST00000526766 1166 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 PCNPP1-201ENST00000552501 511 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 Z98755.1-201ENST00000407015 1384 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AL589993.1-201ENST00000407450 2524 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AL353625.1-202ENST00000366273 571 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC211486.3-201ENST00000412694 621 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 TRGV7-201ENST00000427089 353 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC002075.1-201ENST00000457396 676 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 RPS23P7-201ENST00000466210 444 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 RPS4XP20-201ENST00000505751 772 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AP005432.2-201ENST00000608162 586 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AL356752.1-201ENST00000615844 593 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 TCL6_3.1-201ENST00000619064 137 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 LDHAP2-201ENST00000437325 985 ntBASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 EDA-213ENST00000616899 4643 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS13CQ709C8 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS13CQ709C8 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 AC114947.2-201ENST00000565748 2125 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS13CQ709C8 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VPS13CQ709C8 KYNUP3-201ENST00000574386 1341 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 COX6B1P1-201ENST00000415962 213 ntBASIC4.56□□□□□ -1.68
VPS13CQ709C8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms