Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORA63-201ENST00000363450 132 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 RNU6-348P-201ENST00000384386 107 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 MT-TL1-201ENST00000386347 75 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 OR10U1P-201ENST00000414690 905 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC245517.2-201ENST00000442890 346 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 HMGB1P48-201ENST00000446155 598 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AL929410.2-201ENST00000451170 189 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 RN7SL89P-201ENST00000480252 283 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 RPL7P42-201ENST00000481005 679 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC098583.2-201ENST00000504151 372 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC091839.1-201ENST00000513087 269 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 MTCO1P35-201ENST00000515270 228 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 NTS-203ENST00000551529 801 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC013283.1-201ENST00000557282 492 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC015818.5-201ENST00000578659 356 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 DUXAP4-201ENST00000603046 613 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC010680.3-201ENST00000604215 520 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC018714.1-201ENST00000605028 208 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC073137.1-201ENST00000605636 634 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 RN7SL840P-201ENST00000606883 284 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AL008582.1-201ENST00000609612 442 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC055764.2-201ENST00000610089 670 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC139769.3-201ENST00000618383 175 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC002550.2-201ENST00000621246 394 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AC062029.1-202ENST00000606164 3651 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
FOXR1Q6PIV2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
FOXR1Q6PIV2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
FOXR1Q6PIV2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.84□□□□□ -1.16
FOXR1Q6PIV2 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 AL133279.3-201ENST00000563140 2352 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 OR2W4P-201ENST00000406496 926 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 MTCYBP24-201ENST00000420387 1106 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 FTH1P5-201ENST00000425761 545 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 SEPHS1P1-201ENST00000426891 958 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 RPS4XP16-201ENST00000427198 791 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 RPL12P4-201ENST00000432629 497 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 ATP5LP4-201ENST00000434169 307 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 AL606752.1-201ENST00000435442 666 ntBASIC7.83□□□□□ -1.16
FOXR1Q6PIV2 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms