Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL137067.2-201ENST00000621202 131 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AL035090.1-201ENST00000454835 332 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 OR11J2P-201ENST00000555298 907 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 BNIP3P5-201ENST00000562290 498 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC068790.4-201ENST00000602474 263 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC023818.2-201ENST00000623817 2304 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AL731532.1-201ENST00000623972 4236 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 HSPA8P18-201ENST00000439846 1928 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 MRPL53P1-201ENST00000414323 319 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 RPL7P45-201ENST00000455851 743 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 RPL37AP8-201ENST00000494116 276 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 SNORA58-201ENST00000505219 137 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 C1GALT1P3-201ENST00000522049 819 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 TXNP4-201ENST00000575018 310 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AL392048.1-201ENST00000613946 534 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AP003175.1-201ENST00000641383 6658 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AL034546.1-201ENST00000623740 3693 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 FLJ42393-201ENST00000623801 2270 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 SNORA62-201ENST00000365493 153 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC245028.1-201ENST00000423259 256 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 SCARNA6.1-201ENST00000516989 238 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 OR6M2P-201ENST00000529831 871 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AC087385.3-201ENST00000620477 187 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 AL132640.3-201ENST00000630473 177 ntBASIC5.74□□□□□ -1.49
RIF1Q5UIP0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIF1Q5UIP0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC006141.1-201ENST00000581917 2170 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RNA5SP505-201ENST00000364748 108 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC104837.2-201ENST00000427236 424 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 AC008745.1-201ENST00000604064 271 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIF1Q5UIP0 CTAGE11P-201ENST00000451540 2353 ntBASIC5.73□□□□□ -1.49
RIF1Q5UIP0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms