Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 AL139805.2-201ENST00000455305 2433 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PTCH1Q13635 RPL35AP24-201ENST00000413846 330 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 HMGA1P8-201ENST00000414130 321 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.14□□□□□ -1.11
PTCH1Q13635 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.14□□□□□ -1.11
PTCH1Q13635 RN7SL172P-201ENST00000460535 303 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 RN7SL165P-201ENST00000477476 291 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.14□□□□□ -1.11
PTCH1Q13635 SCARNA6.1-201ENST00000516989 238 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.14□□□□□ -1.11
PTCH1Q13635 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PTCH1Q13635 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8.14□□□□□ -1.11
PTCH1Q13635 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.14□□□□□ -1.11
PTCH1Q13635 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.14□□□□□ -1.11
PTCH1Q13635 RBM22P12-201ENST00000567098 1255 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.14□□□□□ -1.11
PTCH1Q13635 AL683813.2-201ENST00000605245 502 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 AC012557.1-201ENST00000607115 611 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.14□□□□□ -1.11
PTCH1Q13635 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.14□□□□□ -1.11
PTCH1Q13635 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PTCH1Q13635 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PTCH1Q13635 TMEM75-201ENST00000624314 2165 ntBASIC8.14□□□□□ -1.11
PTCH1Q13635 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.13□□□□□ -1.11
PTCH1Q13635 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PTCH1Q13635 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.13□□□□□ -1.11
PTCH1Q13635 AC009804.1-201ENST00000400949 179 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 NENFP1-201ENST00000419476 466 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 AL133173.1-201ENST00000423458 397 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.13□□□□□ -1.11
PTCH1Q13635 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.13□□□□□ -1.11
PTCH1Q13635 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.13□□□□□ -1.11
PTCH1Q13635 AC099521.1-201ENST00000482557 334 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 AOX3P-204ENST00000491025 2107 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 RN7SL808P-201ENST00000496066 299 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.13□□□□□ -1.11
PTCH1Q13635 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.13□□□□□ -1.11
PTCH1Q13635 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PTCH1Q13635 AC004825.1-201ENST00000555068 586 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 AC007494.1-201ENST00000562293 760 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.13□□□□□ -1.11
PTCH1Q13635 AC067852.5-201ENST00000589299 310 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.13□□□□□ -1.11
PTCH1Q13635 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.13□□□□□ -1.11
PTCH1Q13635 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.13□□□□□ -1.11
PTCH1Q13635 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTCH1Q13635 GTF2IP4-201ENST00000453092 2054 ntBASIC8.13□□□□□ -1.11
PTCH1Q13635 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.12□□□□□ -1.11
PTCH1Q13635 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.12□□□□□ -1.11
PTCH1Q13635 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.12□□□□□ -1.11
PTCH1Q13635 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.12□□□□□ -1.11
PTCH1Q13635 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.12□□□□□ -1.11
PTCH1Q13635 CYCSP12-201ENST00000437729 300 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC8.12□□□□□ -1.11
PTCH1Q13635 ST13P12-201ENST00000508958 1094 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 CDC42P3-201ENST00000518493 633 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 HSPE1P2-201ENST00000554777 306 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.12□□□□□ -1.11
PTCH1Q13635 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.12□□□□□ -1.11
PTCH1Q13635 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.12□□□□□ -1.11
PTCH1Q13635 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.12□□□□□ -1.11
PTCH1Q13635 AL355974.3-201ENST00000617383 467 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 AC136428.4-201ENST00000634254 1155 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
PTCH1Q13635 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTCH1Q13635 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.12□□□□□ -1.11
PTCH1Q13635 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms