Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RNU1-88P-201ENST00000459274 128 ntBASIC4.51□□□□□ -1.69
CCL20P78556 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 RPL34P33-201ENST00000486062 334 ntBASIC4.51□□□□□ -1.69
CCL20P78556 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL20P78556 RPL5P3-201ENST00000493817 889 ntBASIC4.51□□□□□ -1.69
CCL20P78556 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 AC021269.1-201ENST00000526860 705 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC130364.2-201ENST00000528639 604 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.51□□□□□ -1.69
CCL20P78556 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 OR4A42P-201ENST00000531397 938 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 AC068993.1-201ENST00000546724 589 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.51□□□□□ -1.69
CCL20P78556 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 AC093591.2-201ENST00000565254 3843 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 RN7SL290P-201ENST00000578661 300 ntBASIC4.51□□□□□ -1.69
CCL20P78556 MIR7853-201ENST00000584820 132 ntBASIC4.51□□□□□ -1.69
CCL20P78556 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 FXYD6P1-201ENST00000604857 285 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 AL078621.3-201ENST00000623707 2042 ntBASIC4.51□□□□□ -1.69
CCL20P78556 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL20P78556 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL20P78556 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL20P78556 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCL20P78556 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCL20P78556 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCL20P78556 SNORA55-201ENST00000364587 135 ntBASIC4.5□□□□□ -1.69
CCL20P78556 AC005042.1-201ENST00000393397 800 ntBASIC4.5□□□□□ -1.69
CCL20P78556 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL20P78556 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 AC002127.1-201ENST00000421305 225 ntBASIC4.5□□□□□ -1.69
CCL20P78556 E2F6P1-201ENST00000428850 745 ntBASIC4.5□□□□□ -1.69
CCL20P78556 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL20P78556 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AC007790.1-201ENST00000439081 782 ntBASIC4.5□□□□□ -1.69
CCL20P78556 E2F6P3-201ENST00000441743 743 ntBASIC4.5□□□□□ -1.69
CCL20P78556 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AC245028.2-201ENST00000458673 253 ntBASIC4.5□□□□□ -1.69
CCL20P78556 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 AC012123.2-201ENST00000485809 248 ntBASIC4.5□□□□□ -1.69
CCL20P78556 RPL21P42-201ENST00000488408 464 ntBASIC4.5□□□□□ -1.69
CCL20P78556 AC083795.1-201ENST00000491760 320 ntBASIC4.5□□□□□ -1.69
CCL20P78556 GM2AP2-201ENST00000491764 562 ntBASIC4.5□□□□□ -1.69
CCL20P78556 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.5□□□□□ -1.69
CCL20P78556 USP9YP2-201ENST00000504503 1000 ntBASIC4.5□□□□□ -1.69
CCL20P78556 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AC105384.2-201ENST00000508433 640 ntBASIC4.5□□□□□ -1.69
CCL20P78556 RPL7L1P7-201ENST00000509986 724 ntBASIC4.5□□□□□ -1.69
CCL20P78556 USP9YP1-201ENST00000513521 1002 ntBASIC4.5□□□□□ -1.69
CCL20P78556 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 NMNAT1P5-201ENST00000559657 841 ntBASIC4.5□□□□□ -1.69
CCL20P78556 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL20P78556 AC091932.1-201ENST00000569381 427 ntBASIC4.5□□□□□ -1.69
CCL20P78556 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 DHFRP1-201ENST00000579682 559 ntBASIC4.5□□□□□ -1.69
CCL20P78556 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 AP006587.6-201ENST00000582128 1091 ntBASIC4.5□□□□□ -1.69
CCL20P78556 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL20P78556 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 SAMMSON-227ENST00000642114 1199 ntBASIC4.5□□□□□ -1.69
CCL20P78556 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL20P78556 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms