Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL360013.1-201ENST00000419031 858 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 MTND4P24-201ENST00000424002 397 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.06□□□□□ -1.6
CX3CL1P78423 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AL606490.7-201ENST00000433136 191 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC007563.3-201ENST00000433233 371 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC064862.5-201ENST00000440618 334 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 SNRPFP2-201ENST00000440710 251 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC245291.3-201ENST00000443400 292 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC234771.2-201ENST00000445718 597 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC009963.4-201ENST00000448535 339 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CX3CL1P78423 SLC25A51P1-201ENST00000468432 871 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AC138517.1-201ENST00000515724 568 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.06□□□□□ -1.6
CX3CL1P78423 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.06□□□□□ -1.6
CX3CL1P78423 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AL121579.2-201ENST00000555466 590 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 MIR3157-201ENST00000578688 85 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AL360012.1-201ENST00000602813 131 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AL008723.3-201ENST00000608926 449 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 AL159169.2-201ENST00000610061 1269 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 CR589904.2-201ENST00000612533 440 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CL1P78423 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 UGT2B24P-201ENST00000514441 1597 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CL1P78423 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CX3CL1P78423 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 AC011503.2-201ENST00000594230 1500 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CX3CL1P78423 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 AC079753.1-201ENST00000623243 3868 ntBASIC5.06□□□□□ -1.6
CX3CL1P78423 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CL1P78423 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CL1P78423 AP002512.4-202ENST00000641599 4530 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CL1P78423 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CL1P78423 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC027575.3-201ENST00000583058 2747 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 AL591135.1-201ENST00000401578 5914 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC116158.1-201ENST00000560231 2129 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CL1P78423 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CX3CL1P78423 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CX3CL1P78423 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 RN7SKP184-201ENST00000362348 333 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 SNORD51.1-201ENST00000365405 77 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 SNORA64.3-201ENST00000365647 134 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CX3CL1P78423 AL034417.1-201ENST00000399343 800 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AL356057.1-202ENST00000402263 756 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 RN7SKP161-201ENST00000411110 305 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CL1P78423 UBE2V1P14-201ENST00000415815 558 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC023141.6-201ENST00000429418 337 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AL138787.1-202ENST00000437804 898 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 RPL12P49-201ENST00000441100 121 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 XKRY2-201ENST00000442362 1093 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC004890.1-201ENST00000461005 181 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 RN7SL714P-201ENST00000487050 298 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms