Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 MIR8082-201ENST00000612488 81 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC105105.5-201ENST00000622635 1294 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 AP003108.4-201ENST00000623917 878 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC017037.3-201ENST00000625016 472 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.97□□□□□ -1.45
CLRN1P58418 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.97□□□□□ -1.45
CLRN1P58418 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLRN1P58418 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 MAPK10-270ENST00000641102 3538 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLRN1P58418 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 RAD17P2-201ENST00000451754 1977 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 HSPD1P1-201ENST00000503199 1726 ntBASIC5.96□□□□□ -1.45
CLRN1P58418 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CLRN1P58418 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLRN1P58418 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CLRN1P58418 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.96□□□□□ -1.45
CLRN1P58418 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLRN1P58418 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLRN1P58418 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 OR2M1P-201ENST00000318104 951 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
CLRN1P58418 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 AC007068.1-201ENST00000396690 844 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AL079341.1-201ENST00000404701 1207 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AL139100.1-201ENST00000408001 498 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 RPL26P37-201ENST00000411983 438 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.96□□□□□ -1.46
CLRN1P58418 OR5M12P-201ENST00000423388 929 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AC000089.1-201ENST00000424559 801 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 RPL7AP71-201ENST00000451120 739 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 RBMY2HP-201ENST00000457961 720 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 SULT1D1P-201ENST00000458020 882 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 RPL7AP30-201ENST00000482859 796 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC109464.1-201ENST00000511091 819 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC010442.1-201ENST00000515583 816 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 RN7SKP98-201ENST00000517070 156 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 AP003717.3-201ENST00000544832 1180 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC091304.4-201ENST00000565703 620 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 MIR4312-201ENST00000579909 76 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 PIGPP4-201ENST00000584447 307 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 RN7SL622P-201ENST00000585292 275 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 AL353778.1-201ENST00000603149 408 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AL359704.2-201ENST00000604335 521 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AC024060.1-201ENST00000607052 494 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 PTCHD3P1-201ENST00000612350 537 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC004241.2-201ENST00000614562 444 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 AP002782.1-201ENST00000623107 614 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.96□□□□□ -1.46
CLRN1P58418 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.96□□□□□ -1.46
CLRN1P58418 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms