Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 FAR2P2-201ENST00000413041 594 ntBASIC10.16□□□□□ -0.78
SMARCA4P51532 FAR2P4-202ENST00000425399 584 ntBASIC10.16□□□□□ -0.78
SMARCA4P51532 AL731534.1-201ENST00000434711 269 ntBASIC10.16□□□□□ -0.78
SMARCA4P51532 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC10.16□□□□□ -0.78
SMARCA4P51532 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC10.16□□□□□ -0.78
SMARCA4P51532 AC090114.3-201ENST00000479267 829 ntBASIC10.16□□□□□ -0.78
SMARCA4P51532 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC10.16□□□□□ -0.78
SMARCA4P51532 AC069307.1-201ENST00000602820 447 ntBASIC10.16□□□□□ -0.78
SMARCA4P51532 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC10.16□□□□□ -0.78
SMARCA4P51532 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SMARCA4P51532 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC10.16□□□□□ -0.78
SMARCA4P51532 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC10.16□□□□□ -0.78
SMARCA4P51532 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SMARCA4P51532 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
SMARCA4P51532 RN7SKP279-201ENST00000411383 298 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC10.15□□□□□ -0.78
SMARCA4P51532 CEACAMP7-201ENST00000444105 496 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 AC083982.1-201ENST00000485679 344 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 AC093890.1-201ENST00000502554 540 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC10.15□□□□□ -0.78
SMARCA4P51532 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC10.15□□□□□ -0.78
SMARCA4P51532 AC013701.1-201ENST00000522657 465 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 OR5AZ1P-201ENST00000527448 943 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 AC137768.1-201ENST00000549998 553 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA4P51532 MIR4330-201ENST00000579077 105 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 AC011497.2-201ENST00000600255 639 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC10.15□□□□□ -0.78
SMARCA4P51532 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SMARCA4P51532 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA4P51532 CPS1-IT1-201ENST00000628368 2306 ntBASIC10.15□□□□□ -0.78
SMARCA4P51532 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA4P51532 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA4P51532 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA4P51532 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC10.15□□□□□ -0.79
SMARCA4P51532 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC10.15□□□□□ -0.79
SMARCA4P51532 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
SMARCA4P51532 AL121768.1-201ENST00000613917 2544 ntBASIC10.15□□□□□ -0.79
SMARCA4P51532 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC10.15□□□□□ -0.79
SMARCA4P51532 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
SMARCA4P51532 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
SMARCA4P51532 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC10.15□□□□□ -0.79
SMARCA4P51532 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC10.15□□□□□ -0.79
SMARCA4P51532 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC10.15□□□□□ -0.79
SMARCA4P51532 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC10.15□□□□□ -0.79
SMARCA4P51532 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC10.15□□□□□ -0.79
SMARCA4P51532 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC10.15□□□□□ -0.79
SMARCA4P51532 MAL2-207ENST00000522828 603 ntTSL 3 BASIC10.15□□□□□ -0.79
SMARCA4P51532 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
SMARCA4P51532 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC10.15□□□□□ -0.79
SMARCA4P51532 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 AL662795.2-201ENST00000624252 3706 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 ZNF101P1-201ENST00000435701 1720 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC10.14□□□□□ -0.79
SMARCA4P51532 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC10.14□□□□□ -0.79
SMARCA4P51532 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC10.14□□□□□ -0.79
SMARCA4P51532 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC10.14□□□□□ -0.79
SMARCA4P51532 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SMARCA4P51532 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 SNORA16A-201ENST00000384342 137 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
SMARCA4P51532 RPL23AP18-201ENST00000416139 468 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 AC011742.2-201ENST00000443818 352 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC10.14□□□□□ -0.79
SMARCA4P51532 AC139697.1-201ENST00000548429 745 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC10.14□□□□□ -0.79
SMARCA4P51532 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
SMARCA4P51532 AC009163.6-201ENST00000612367 342 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 AC087385.3-201ENST00000620477 187 ntBASIC10.14□□□□□ -0.79
SMARCA4P51532 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA4P51532 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SMARCA4P51532 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC10.13□□□□□ -0.79
SMARCA4P51532 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
SMARCA4P51532 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 CDC123-202ENST00000378900 933 ntTSL 5 BASIC10.13□□□□□ -0.79
SMARCA4P51532 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 RPL26P29-201ENST00000415623 438 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 AC016027.5-201ENST00000427227 210 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC10.13□□□□□ -0.79
SMARCA4P51532 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms