Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 RNA5SP346-201ENST00000363541 121 ntBASIC5.3□□□□□ -1.56
SRP9P49458 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SRP9P49458 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SRP9P49458 RNA5SP198-201ENST00000410376 127 ntBASIC5.3□□□□□ -1.56
SRP9P49458 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.3□□□□□ -1.56
SRP9P49458 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.3□□□□□ -1.56
SRP9P49458 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 OR3D1P-201ENST00000438288 955 ntBASIC5.3□□□□□ -1.56
SRP9P49458 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 AC016908.1-201ENST00000442571 1219 ntBASIC5.3□□□□□ -1.56
SRP9P49458 HIGD1AP16-201ENST00000450986 258 ntBASIC5.3□□□□□ -1.56
SRP9P49458 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 AL133351.3-201ENST00000454998 193 ntBASIC5.3□□□□□ -1.56
SRP9P49458 TRBV5-2-201ENST00000489095 273 ntBASIC5.3□□□□□ -1.56
SRP9P49458 NPM1P28-201ENST00000492269 840 ntBASIC5.3□□□□□ -1.56
SRP9P49458 RN7SL649P-201ENST00000496974 275 ntBASIC5.3□□□□□ -1.56
SRP9P49458 RPS26P24-201ENST00000497656 331 ntBASIC5.3□□□□□ -1.56
SRP9P49458 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 AC090958.1-201ENST00000511122 351 ntBASIC5.3□□□□□ -1.56
SRP9P49458 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 AC244502.2-201ENST00000543361 851 ntBASIC5.3□□□□□ -1.56
SRP9P49458 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.3□□□□□ -1.56
SRP9P49458 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.3□□□□□ -1.56
SRP9P49458 SMIM12P1-201ENST00000603004 274 ntBASIC5.3□□□□□ -1.56
SRP9P49458 AP001823.1-201ENST00000604056 1003 ntBASIC5.3□□□□□ -1.56
SRP9P49458 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.3□□□□□ -1.56
SRP9P49458 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.3□□□□□ -1.56
SRP9P49458 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SRP9P49458 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SRP9P49458 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
SRP9P49458 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRP9P49458 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SRP9P49458 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.3□□□□□ -1.56
SRP9P49458 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.3□□□□□ -1.56
SRP9P49458 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SRP9P49458 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 RNU1-49P-201ENST00000363468 159 ntBASIC5.29□□□□□ -1.56
SRP9P49458 RNA5SP279-201ENST00000365513 117 ntBASIC5.29□□□□□ -1.56
SRP9P49458 RBBP4P5-201ENST00000398583 1266 ntBASIC5.29□□□□□ -1.56
SRP9P49458 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.29□□□□□ -1.56
SRP9P49458 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 AC092865.3-201ENST00000425390 1026 ntBASIC5.29□□□□□ -1.56
SRP9P49458 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.29□□□□□ -1.56
SRP9P49458 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.29□□□□□ -1.56
SRP9P49458 EEF1B2P3-201ENST00000447718 678 ntBASIC5.29□□□□□ -1.56
SRP9P49458 AC093166.3-201ENST00000448785 303 ntBASIC5.29□□□□□ -1.56
SRP9P49458 YRDCP3-201ENST00000456507 480 ntBASIC5.29□□□□□ -1.56
SRP9P49458 AC019084.1-201ENST00000457337 432 ntBASIC5.29□□□□□ -1.56
SRP9P49458 RARRES2P3-201ENST00000457739 473 ntBASIC5.29□□□□□ -1.56
SRP9P49458 RPL12P30-201ENST00000488389 499 ntBASIC5.29□□□□□ -1.56
SRP9P49458 SNX18P24-201ENST00000505249 671 ntBASIC5.29□□□□□ -1.56
SRP9P49458 AC112484.3-201ENST00000505910 329 ntBASIC5.29□□□□□ -1.56
SRP9P49458 ZNF519P4-201ENST00000514008 125 ntBASIC5.29□□□□□ -1.56
SRP9P49458 MAST4-IT1-201ENST00000514241 658 ntBASIC5.29□□□□□ -1.56
SRP9P49458 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.29□□□□□ -1.56
SRP9P49458 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 AL049779.3-201ENST00000557141 606 ntBASIC5.29□□□□□ -1.56
SRP9P49458 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.29□□□□□ -1.56
SRP9P49458 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SRP9P49458 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.29□□□□□ -1.56
SRP9P49458 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms