Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RPS7P11-201ENST00000484240 586 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 RPL10P7-201ENST00000495649 625 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 ST13P12-201ENST00000508958 1094 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC097486.1-201ENST00000515331 210 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-1P43699 SNORA26.10-201ENST00000516427 141 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC092451.2-201ENST00000538746 658 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.05□□□□□ -1.6
NKX2-1P43699 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-1P43699 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 RN7SL426P-201ENST00000579106 295 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-1P43699 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC023206.1-201ENST00000605824 298 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 RMST_5.1-201ENST00000618704 126 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 LINC00216-201ENST00000623548 1126 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AL138960.2-201ENST00000625145 535 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
NKX2-1P43699 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 AL353743.3-201ENST00000442109 1468 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-1P43699 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-1P43699 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 PPIAP24-201ENST00000328558 471 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 RNA5SP152-201ENST00000365184 110 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-1P43699 MIR187-201ENST00000385062 109 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 FDPSP5-201ENST00000399474 1057 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 EEF1GP6-201ENST00000402309 905 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AL079341.1-201ENST00000404701 1207 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 RN7SKP281-201ENST00000410472 352 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC074367.1-201ENST00000438685 1125 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AL592114.2-201ENST00000440142 532 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 CCNJP1-201ENST00000450600 1149 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AC063955.1-201ENST00000462872 685 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AC098583.1-201ENST00000480875 255 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 OR11I1P-201ENST00000486033 954 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 TRBV5-2-201ENST00000489095 273 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 RN7SL284P-201ENST00000498823 275 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC106806.2-201ENST00000509365 500 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX2-1P43699 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AC092868.3-201ENST00000560515 784 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AL589863.1-201ENST00000595383 631 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AP004372.1-201ENST00000604842 844 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC144521.1-201ENST00000607148 956 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 AL121985.3-201ENST00000620690 523 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC015722.2-201ENST00000622210 551 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AC127071.2-201ENST00000623293 527 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 SMG1P5-202ENST00000529428 4219 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 SMG1P2-201ENST00000566127 4221 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 CASC19-260ENST00000641828 2001 ntBASIC5.04□□□□□ -1.6
NKX2-1P43699 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-1P43699 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-1P43699 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 NLRP3P1-201ENST00000622303 1785 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms