Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC092681.3-201ENST00000609463 678 ntBASIC6.32□□□□□ -1.4
CHRNA3P32297 MIR6778-201ENST00000617912 73 ntBASIC6.32□□□□□ -1.4
CHRNA3P32297 AC005899.7-201ENST00000618199 588 ntBASIC6.32□□□□□ -1.4
CHRNA3P32297 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHRNA3P32297 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.32□□□□□ -1.4
CHRNA3P32297 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.32□□□□□ -1.4
CHRNA3P32297 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.32□□□□□ -1.4
CHRNA3P32297 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CHRNA3P32297 AC011416.1-201ENST00000514947 1732 ntBASIC6.32□□□□□ -1.4
CHRNA3P32297 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.32□□□□□ -1.4
CHRNA3P32297 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CHRNA3P32297 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CHRNA3P32297 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHRNA3P32297 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHRNA3P32297 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHRNA3P32297 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.32□□□□□ -1.4
CHRNA3P32297 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHRNA3P32297 HSPD1P9-201ENST00000420325 1636 ntBASIC6.32□□□□□ -1.4
CHRNA3P32297 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
CHRNA3P32297 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHRNA3P32297 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHRNA3P32297 AC137056.2-201ENST00000624055 1958 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHRNA3P32297 EIF3EP1-201ENST00000433978 1316 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 AC018717.1-201ENST00000457712 1505 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHRNA3P32297 AC015799.1-201ENST00000622996 3122 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.31□□□□□ -1.4
CHRNA3P32297 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHRNA3P32297 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 PPIAP7-201ENST00000454070 489 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.31□□□□□ -1.4
CHRNA3P32297 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.31□□□□□ -1.4
CHRNA3P32297 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.31□□□□□ -1.4
CHRNA3P32297 Y_RNA.710-201ENST00000516975 110 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 RN7SKP35-201ENST00000517210 151 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 AC136777.2-201ENST00000522979 358 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 AP000620.1-201ENST00000527147 504 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.31□□□□□ -1.4
CHRNA3P32297 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.31□□□□□ -1.4
CHRNA3P32297 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.31□□□□□ -1.4
CHRNA3P32297 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA3P32297 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 AL355974.3-201ENST00000617383 467 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 FAM27E2-201ENST00000619668 403 ntBASIC6.31□□□□□ -1.4
CHRNA3P32297 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.31□□□□□ -1.4
CHRNA3P32297 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHRNA3P32297 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHRNA3P32297 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CHRNA3P32297 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 AL355488.2-201ENST00000609909 2850 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CHRNA3P32297 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
CHRNA3P32297 COX6B1P3-201ENST00000312310 260 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 RNA5SP110-201ENST00000362638 115 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA3P32297 RN7SKP240-201ENST00000410583 375 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 MYL6P5-201ENST00000412707 459 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC017078.1-201ENST00000416146 368 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 RPL6P30-201ENST00000443382 862 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 AC097463.1-201ENST00000447288 481 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.3□□□□□ -1.4
CHRNA3P32297 RBBP4P1-201ENST00000502424 1276 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC090958.1-201ENST00000511122 351 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 RNU6-1334P-201ENST00000516032 105 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC007346.1-201ENST00000569208 867 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.3□□□□□ -1.4
CHRNA3P32297 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 AC119403.2-201ENST00000590960 598 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 AC022106.1-201ENST00000612834 766 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.3□□□□□ -1.4
CHRNA3P32297 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.3□□□□□ -1.4
CHRNA3P32297 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA3P32297 MIR1910-201ENST00000636955 80 ntBASIC6.3□□□□□ -1.4
CHRNA3P32297 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CHRNA3P32297 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.3□□□□□ -1.4
CHRNA3P32297 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA3P32297 THAP12P9-201ENST00000503971 2360 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms