Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 UGT2B25P-201ENST00000511504 1586 ntBASIC8.11□□□□□ -1.11
RFX1P22670 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RFX1P22670 PPIAP22-201ENST00000358455 498 ntBASIC8.11□□□□□ -1.11
RFX1P22670 RNU6-1339P-201ENST00000363574 91 ntBASIC8.11□□□□□ -1.11
RFX1P22670 RNU1-16P-201ENST00000365477 164 ntBASIC8.11□□□□□ -1.11
RFX1P22670 MIR138-2-201ENST00000384916 84 ntBASIC8.11□□□□□ -1.11
RFX1P22670 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.11□□□□□ -1.11
RFX1P22670 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 Z99497.1-201ENST00000421282 135 ntBASIC8.11□□□□□ -1.11
RFX1P22670 MTND4LP11-201ENST00000422184 280 ntBASIC8.11□□□□□ -1.11
RFX1P22670 DDX11L10-201ENST00000430178 571 ntBASIC8.11□□□□□ -1.11
RFX1P22670 AC009263.1-201ENST00000441193 1239 ntBASIC8.11□□□□□ -1.11
RFX1P22670 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 AC114928.1-201ENST00000446516 415 ntBASIC8.11□□□□□ -1.11
RFX1P22670 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 RN7SL612P-201ENST00000497704 295 ntBASIC8.11□□□□□ -1.11
RFX1P22670 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.11□□□□□ -1.11
RFX1P22670 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 TBCA-206ENST00000518338 551 ntTSL 2 BASIC8.11□□□□□ -1.11
RFX1P22670 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.11□□□□□ -1.11
RFX1P22670 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 OR7E87P-201ENST00000532397 929 ntBASIC8.11□□□□□ -1.11
RFX1P22670 ATP5J2P4-201ENST00000538774 267 ntBASIC8.11□□□□□ -1.11
RFX1P22670 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RFX1P22670 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RFX1P22670 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 AC138749.2-201ENST00000566048 167 ntBASIC8.11□□□□□ -1.11
RFX1P22670 EIF1P4-201ENST00000572664 335 ntBASIC8.11□□□□□ -1.11
RFX1P22670 MIR3611-201ENST00000584484 83 ntBASIC8.11□□□□□ -1.11
RFX1P22670 RPS28P1-201ENST00000604589 187 ntBASIC8.11□□□□□ -1.11
RFX1P22670 CR382285.1-202ENST00000604687 547 ntBASIC8.11□□□□□ -1.11
RFX1P22670 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 AC073534.2-201ENST00000620377 381 ntBASIC8.11□□□□□ -1.11
RFX1P22670 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 AL359091.1-201ENST00000449048 1734 ntBASIC8.11□□□□□ -1.11
RFX1P22670 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.11□□□□□ -1.11
RFX1P22670 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.11□□□□□ -1.11
RFX1P22670 FOLH1B-202ENST00000529567 2145 ntBASIC8.11□□□□□ -1.11
RFX1P22670 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 ARHGAP42P1-201ENST00000507474 1976 ntBASIC8.1□□□□□ -1.11
RFX1P22670 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RFX1P22670 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RFX1P22670 TMSB4XP2-201ENST00000335179 210 ntBASIC8.1□□□□□ -1.11
RFX1P22670 RN7SKP184-201ENST00000362348 333 ntBASIC8.1□□□□□ -1.11
RFX1P22670 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 RNU6-1215P-201ENST00000384441 102 ntBASIC8.1□□□□□ -1.11
RFX1P22670 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RFX1P22670 NACAP7-201ENST00000407371 609 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AL139100.1-201ENST00000408001 498 ntBASIC8.1□□□□□ -1.11
RFX1P22670 GLS-204ENST00000409428 816 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 RNA5SP80-201ENST00000410475 111 ntBASIC8.1□□□□□ -1.11
RFX1P22670 RNU2-16P-201ENST00000410712 136 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RFX1P22670 DPY19L1P2-201ENST00000426647 915 ntBASIC8.1□□□□□ -1.11
RFX1P22670 OR52S1P-201ENST00000427016 937 ntBASIC8.1□□□□□ -1.11
RFX1P22670 MTCO1P54-201ENST00000430139 712 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RFX1P22670 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 SS18L2P1-201ENST00000445923 213 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 234.3 ms