Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AC008945.1-201ENST00000505144 499 ntBASIC6.01□□□□□ -1.45
MSH3P20585 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.01□□□□□ -1.45
MSH3P20585 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.01□□□□□ -1.45
MSH3P20585 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.01□□□□□ -1.45
MSH3P20585 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH3P20585 DPPA3P2-202ENST00000557188 1219 ntBASIC6.01□□□□□ -1.45
MSH3P20585 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.01□□□□□ -1.45
MSH3P20585 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
MSH3P20585 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.01□□□□□ -1.45
MSH3P20585 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.01□□□□□ -1.45
MSH3P20585 AC004890.3-201ENST00000605566 1095 ntBASIC6.01□□□□□ -1.45
MSH3P20585 AP001437.1-201ENST00000608783 456 ntBASIC6.01□□□□□ -1.45
MSH3P20585 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH3P20585 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.01□□□□□ -1.45
MSH3P20585 AC096861.1-201ENST00000616652 240 ntBASIC6.01□□□□□ -1.45
MSH3P20585 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.01□□□□□ -1.45
MSH3P20585 AC073488.3-201ENST00000631611 778 ntBASIC6.01□□□□□ -1.45
MSH3P20585 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.01□□□□□ -1.45
MSH3P20585 OR8A1-204ENST00000642111 1145 ntBASIC6.01□□□□□ -1.45
MSH3P20585 AC015799.1-201ENST00000622996 3122 ntBASIC6.01□□□□□ -1.45
MSH3P20585 AC139426.3-201ENST00000605648 2059 ntBASIC6.01□□□□□ -1.45
MSH3P20585 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH3P20585 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH3P20585 RBMY1HP-201ENST00000382759 1389 ntBASIC6.01□□□□□ -1.45
MSH3P20585 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH3P20585 AC005725.1-201ENST00000577346 2607 ntBASIC6.01□□□□□ -1.45
MSH3P20585 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH3P20585 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MSH3P20585 AP000432.2-201ENST00000624164 2048 ntBASIC6.01□□□□□ -1.45
MSH3P20585 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.01□□□□□ -1.45
MSH3P20585 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6□□□□□ -1.45
MSH3P20585 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MSH3P20585 AL049634.1-201ENST00000453770 1720 ntBASIC6□□□□□ -1.45
MSH3P20585 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MSH3P20585 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 COX6B1P3-201ENST00000312310 260 ntBASIC6□□□□□ -1.45
MSH3P20585 OR10R3P-201ENST00000361688 942 ntBASIC6□□□□□ -1.45
MSH3P20585 SNORD1C-201ENST00000363315 78 ntBASIC6□□□□□ -1.45
MSH3P20585 SNORA51.9-201ENST00000384295 124 ntBASIC6□□□□□ -1.45
MSH3P20585 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6□□□□□ -1.45
MSH3P20585 AC245096.1-201ENST00000413104 546 ntBASIC6□□□□□ -1.45
MSH3P20585 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6□□□□□ -1.45
MSH3P20585 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6□□□□□ -1.45
MSH3P20585 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 AL512593.1-201ENST00000444758 779 ntBASIC6□□□□□ -1.45
MSH3P20585 VN1R96P-201ENST00000446052 858 ntBASIC6□□□□□ -1.45
MSH3P20585 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6□□□□□ -1.45
MSH3P20585 AC068228.1-201ENST00000461723 211 ntBASIC6□□□□□ -1.45
MSH3P20585 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6□□□□□ -1.45
MSH3P20585 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6□□□□□ -1.45
MSH3P20585 AC124945.1-201ENST00000485133 188 ntBASIC6□□□□□ -1.45
MSH3P20585 RPL37P23-201ENST00000492641 294 ntBASIC6□□□□□ -1.45
MSH3P20585 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 AL158068.1-201ENST00000506116 616 ntBASIC6□□□□□ -1.45
MSH3P20585 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6□□□□□ -1.45
MSH3P20585 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6□□□□□ -1.45
MSH3P20585 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6□□□□□ -1.45
MSH3P20585 AC107958.1-201ENST00000556576 290 ntBASIC6□□□□□ -1.45
MSH3P20585 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6□□□□□ -1.45
MSH3P20585 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6□□□□□ -1.45
MSH3P20585 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6□□□□□ -1.45
MSH3P20585 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6□□□□□ -1.45
MSH3P20585 AP005212.4-201ENST00000614206 710 ntBASIC6□□□□□ -1.45
MSH3P20585 AL031658.2-201ENST00000616850 651 ntBASIC6□□□□□ -1.45
MSH3P20585 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
MSH3P20585 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6□□□□□ -1.45
MSH3P20585 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
MSH3P20585 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
MSH3P20585 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 AC018628.1-201ENST00000624147 3819 ntBASIC6□□□□□ -1.45
MSH3P20585 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MSH3P20585 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH3P20585 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
MSH3P20585 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
MSH3P20585 AC119674.1-202ENST00000641333 1860 ntBASIC5.99□□□□□ -1.45
MSH3P20585 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
MSH3P20585 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms