Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RETP07949 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.22□□□□□ -1.41
RETP07949 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.22□□□□□ -1.41
RETP07949 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.22□□□□□ -1.41
RETP07949 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 RNU1-19P-201ENST00000363306 165 ntBASIC6.22□□□□□ -1.41
RETP07949 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RETP07949 AC116036.1-201ENST00000412199 367 ntBASIC6.22□□□□□ -1.41
RETP07949 AC245096.1-201ENST00000413104 546 ntBASIC6.22□□□□□ -1.41
RETP07949 DPPA2P2-201ENST00000418220 897 ntBASIC6.22□□□□□ -1.41
RETP07949 AC117434.1-201ENST00000419971 836 ntBASIC6.22□□□□□ -1.41
RETP07949 NANOGP4-201ENST00000427230 913 ntBASIC6.22□□□□□ -1.41
RETP07949 RPS27P18-201ENST00000431701 247 ntBASIC6.22□□□□□ -1.41
RETP07949 OR3D1P-201ENST00000438288 955 ntBASIC6.22□□□□□ -1.41
RETP07949 SETP4-201ENST00000455717 868 ntBASIC6.22□□□□□ -1.41
RETP07949 RN7SL799P-201ENST00000475891 298 ntBASIC6.22□□□□□ -1.41
RETP07949 AC092865.4-201ENST00000477936 615 ntBASIC6.22□□□□□ -1.41
RETP07949 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.22□□□□□ -1.41
RETP07949 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.22□□□□□ -1.41
RETP07949 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.22□□□□□ -1.41
RETP07949 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.22□□□□□ -1.41
RETP07949 RNA5SP34-201ENST00000516887 130 ntBASIC6.22□□□□□ -1.41
RETP07949 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.22□□□□□ -1.41
RETP07949 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.22□□□□□ -1.41
RETP07949 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.22□□□□□ -1.41
RETP07949 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.22□□□□□ -1.41
RETP07949 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.22□□□□□ -1.41
RETP07949 BUB1P1-201ENST00000603541 607 ntBASIC6.22□□□□□ -1.41
RETP07949 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.22□□□□□ -1.41
RETP07949 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.22□□□□□ -1.41
RETP07949 AC018445.2-201ENST00000622987 260 ntBASIC6.22□□□□□ -1.41
RETP07949 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RETP07949 AP004289.1-201ENST00000436307 2205 ntBASIC6.22□□□□□ -1.41
RETP07949 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.22□□□□□ -1.41
RETP07949 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.22□□□□□ -1.41
RETP07949 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RETP07949 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.21□□□□□ -1.41
RETP07949 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
RETP07949 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
RETP07949 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.21□□□□□ -1.41
RETP07949 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RETP07949 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RETP07949 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RETP07949 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.21□□□□□ -1.42
RETP07949 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RETP07949 HSPD1P8-201ENST00000400121 1658 ntBASIC6.21□□□□□ -1.42
RETP07949 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.21□□□□□ -1.42
RETP07949 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RETP07949 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RETP07949 RN7SKP121-201ENST00000410842 305 ntBASIC6.21□□□□□ -1.42
RETP07949 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.21□□□□□ -1.42
RETP07949 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.21□□□□□ -1.42
RETP07949 SEPT14P12-201ENST00000442280 560 ntBASIC6.21□□□□□ -1.42
RETP07949 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.21□□□□□ -1.42
RETP07949 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.21□□□□□ -1.42
RETP07949 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.21□□□□□ -1.42
RETP07949 SETP21-201ENST00000514799 892 ntBASIC6.21□□□□□ -1.42
RETP07949 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.21□□□□□ -1.42
RETP07949 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.21□□□□□ -1.42
RETP07949 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.21□□□□□ -1.42
RETP07949 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
RETP07949 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.21□□□□□ -1.42
RETP07949 AP005119.1-201ENST00000580956 292 ntBASIC6.21□□□□□ -1.42
RETP07949 AC005244.1-201ENST00000582566 339 ntBASIC6.21□□□□□ -1.42
RETP07949 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.21□□□□□ -1.42
RETP07949 AL031658.2-201ENST00000616850 651 ntBASIC6.21□□□□□ -1.42
RETP07949 AP005431.1-201ENST00000618479 319 ntBASIC6.21□□□□□ -1.42
RETP07949 AC118658.2-201ENST00000618697 459 ntBASIC6.21□□□□□ -1.42
RETP07949 AF117829.2-201ENST00000619538 361 ntBASIC6.21□□□□□ -1.42
RETP07949 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.21□□□□□ -1.42
RETP07949 AC096708.4-201ENST00000620563 552 ntBASIC6.21□□□□□ -1.42
RETP07949 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RETP07949 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RETP07949 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RETP07949 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.21□□□□□ -1.42
RETP07949 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
RETP07949 AL359976.1-201ENST00000418655 3528 ntBASIC6.21□□□□□ -1.42
RETP07949 NEK2P2-201ENST00000438441 1338 ntBASIC6.21□□□□□ -1.42
RETP07949 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.21□□□□□ -1.42
RETP07949 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RETP07949 AC011455.2-201ENST00000599320 3336 ntBASIC6.2□□□□□ -1.42
RETP07949 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RETP07949 AL132656.3-201ENST00000606384 1595 ntBASIC6.2□□□□□ -1.42
RETP07949 AF287957.1-201ENST00000607368 1595 ntBASIC6.2□□□□□ -1.42
RETP07949 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RETP07949 RNA5SP132-201ENST00000364725 118 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms