Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 TMSB4XP4-201ENST00000323496 618 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 RNU1-150P-201ENST00000362491 162 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 SNORA81-201ENST00000408493 178 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 BMS1P10-201ENST00000443754 1120 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 RAB28P2-201ENST00000454299 641 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 PCNAP4-201ENST00000532690 730 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 AL021918.2-201ENST00000613415 194 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 AC097520.1-201ENST00000624435 385 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-DOAP06340 AL139254.3-201ENST00000641097 674 ntBASIC7.15□□□□□ -1.26
HLA-DOAP06340 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-DOAP06340 AC024341.1-201ENST00000526444 1552 ntBASIC7.15□□□□□ -1.27
HLA-DOAP06340 AC015689.2-201ENST00000528172 1738 ntBASIC7.15□□□□□ -1.27
HLA-DOAP06340 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HLA-DOAP06340 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.15□□□□□ -1.27
HLA-DOAP06340 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.15□□□□□ -1.27
HLA-DOAP06340 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.15□□□□□ -1.27
HLA-DOAP06340 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 RPS3AP2-201ENST00000407190 754 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 RNA5SP178-201ENST00000410380 128 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 RN7SKP206-201ENST00000410823 293 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 NMD3P2-201ENST00000421815 761 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 WDR95P-201ENST00000425638 1542 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 BX323845.3-201ENST00000428215 527 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 XKRYP6-201ENST00000440468 1116 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 MTCO3P43-201ENST00000440974 771 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 XKRYP3-201ENST00000442113 1116 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 RN7SL101P-201ENST00000496350 279 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 AC106872.4-201ENST00000510050 523 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 AC010374.2-201ENST00000512933 535 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 SNORD116-30-201ENST00000516468 85 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 BNIP3P40-201ENST00000596017 556 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 GMCL1P2-201ENST00000605230 823 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 AC021766.1-201ENST00000624404 741 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 OR8G3P-202ENST00000641572 1255 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 AC009779.8-201ENST00000641684 4384 ntBASIC7.14□□□□□ -1.27
HLA-DOAP06340 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-DOAP06340 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-DOAP06340 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 NEPNP-201ENST00000404786 1371 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-DOAP06340 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 RN7SKP77-201ENST00000363261 353 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC016739.1-201ENST00000405359 345 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 AL512422.1-201ENST00000407033 553 ntBASIC7.13□□□□□ -1.27
HLA-DOAP06340 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-DOAP06340 AC245060.4-201ENST00000413293 1121 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms