Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.25□□□□□ -1.57
APOA1P02647 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.25□□□□□ -1.57
APOA1P02647 AC007066.2-202ENST00000566531 914 ntBASIC5.25□□□□□ -1.57
APOA1P02647 RNU4ATAC-201ENST00000580972 127 ntBASIC5.25□□□□□ -1.57
APOA1P02647 WBP1LP11-201ENST00000586141 328 ntBASIC5.25□□□□□ -1.57
APOA1P02647 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.25□□□□□ -1.57
APOA1P02647 AC114477.1-201ENST00000605097 605 ntBASIC5.25□□□□□ -1.57
APOA1P02647 AL122125.1-201ENST00000616999 600 ntBASIC5.25□□□□□ -1.57
APOA1P02647 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
APOA1P02647 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.25□□□□□ -1.57
APOA1P02647 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.25□□□□□ -1.57
APOA1P02647 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
APOA1P02647 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 CR382285.2-201ENST00000624662 1495 ntBASIC5.25□□□□□ -1.57
APOA1P02647 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.25□□□□□ -1.57
APOA1P02647 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOA1P02647 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 AC079248.1-201ENST00000427568 1546 ntBASIC5.24□□□□□ -1.57
APOA1P02647 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
APOA1P02647 SNORA55-201ENST00000364587 135 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AL035467.1-201ENST00000403583 686 ntBASIC5.24□□□□□ -1.57
APOA1P02647 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 RN7SKP279-201ENST00000411383 298 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AC091492.1-201ENST00000419844 272 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.24□□□□□ -1.57
APOA1P02647 AP003385.1-201ENST00000426387 893 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.24□□□□□ -1.57
APOA1P02647 AL359265.1-201ENST00000440296 795 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.24□□□□□ -1.57
APOA1P02647 AL020997.1-201ENST00000446554 349 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.24□□□□□ -1.57
APOA1P02647 RN7SL326P-201ENST00000477493 296 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AC018475.1-201ENST00000478358 465 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AC098583.1-201ENST00000480875 255 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.24□□□□□ -1.57
APOA1P02647 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.24□□□□□ -1.57
APOA1P02647 RNU6-513P-201ENST00000516104 104 ntBASIC5.24□□□□□ -1.57
APOA1P02647 NPIPB14P-203ENST00000532298 987 ntBASIC5.24□□□□□ -1.57
APOA1P02647 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.24□□□□□ -1.57
APOA1P02647 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.24□□□□□ -1.57
APOA1P02647 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 MIR4472-2-201ENST00000582069 67 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.24□□□□□ -1.57
APOA1P02647 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 RN7SL261P-201ENST00000613441 282 ntBASIC5.24□□□□□ -1.57
APOA1P02647 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
APOA1P02647 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
APOA1P02647 AL353796.1-201ENST00000561542 3241 ntBASIC5.24□□□□□ -1.57
APOA1P02647 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 AF287957.1-201ENST00000607368 1595 ntBASIC5.24□□□□□ -1.57
APOA1P02647 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.24□□□□□ -1.57
APOA1P02647 AC007938.2-201ENST00000604666 2634 ntBASIC5.24□□□□□ -1.57
APOA1P02647 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOA1P02647 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.24□□□□□ -1.57
APOA1P02647 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.23□□□□□ -1.57
APOA1P02647 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
APOA1P02647 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.23□□□□□ -1.57
APOA1P02647 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
APOA1P02647 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOA1P02647 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOA1P02647 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOA1P02647 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.23□□□□□ -1.57
APOA1P02647 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
APOA1P02647 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
APOA1P02647 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOA1P02647 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOA1P02647 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOA1P02647 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOA1P02647 MIR188-201ENST00000385034 86 ntBASIC5.23□□□□□ -1.57
APOA1P02647 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
APOA1P02647 RPSAP44-201ENST00000406712 884 ntBASIC5.23□□□□□ -1.57
APOA1P02647 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.23□□□□□ -1.57
APOA1P02647 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.23□□□□□ -1.57
APOA1P02647 HYALP1-201ENST00000417674 1279 ntBASIC5.23□□□□□ -1.57
APOA1P02647 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.23□□□□□ -1.57
APOA1P02647 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.23□□□□□ -1.57
APOA1P02647 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms