Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CXCR2P1-202ENST00000443392 1074 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXN3O00409 CTSLP6-201ENST00000458273 1002 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXN3O00409 AC008945.1-201ENST00000505144 499 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 SNX18P24-201ENST00000505249 671 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
FOXN3O00409 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.65□□□□□ -1.34
FOXN3O00409 SNORA74.1-201ENST00000516320 180 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.65□□□□□ -1.34
FOXN3O00409 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.65□□□□□ -1.34
FOXN3O00409 RNU4ATAC-201ENST00000580972 127 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 AC020916.2-201ENST00000591242 360 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 AC011891.2-201ENST00000604949 397 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.65□□□□□ -1.34
FOXN3O00409 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.65□□□□□ -1.34
FOXN3O00409 AL137067.2-201ENST00000621202 131 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.65□□□□□ -1.34
FOXN3O00409 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
FOXN3O00409 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FOXN3O00409 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.65□□□□□ -1.35
FOXN3O00409 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
FOXN3O00409 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.65□□□□□ -1.35
FOXN3O00409 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FOXN3O00409 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
FOXN3O00409 AC110792.3-201ENST00000595906 1614 ntBASIC6.65□□□□□ -1.35
FOXN3O00409 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.65□□□□□ -1.35
FOXN3O00409 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
FOXN3O00409 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXN3O00409 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
FOXN3O00409 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
FOXN3O00409 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXN3O00409 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXN3O00409 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXN3O00409 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXN3O00409 MTCO1P51-201ENST00000427672 1060 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXN3O00409 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
FOXN3O00409 AC099670.1-201ENST00000455141 783 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 SNRPCP11-201ENST00000492453 205 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.64□□□□□ -1.35
FOXN3O00409 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXN3O00409 Y_RNA.710-201ENST00000516975 110 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 AP001804.1-201ENST00000526868 919 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXN3O00409 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.64□□□□□ -1.35
FOXN3O00409 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXN3O00409 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXN3O00409 AC007494.1-201ENST00000562293 760 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 MIR744-201ENST00000578242 98 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 MIR6811-201ENST00000620409 58 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 AC007603.3-201ENST00000636915 979 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 GTF2IP4-201ENST00000453092 2054 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 AC005225.5-201ENST00000623547 2225 ntBASIC6.64□□□□□ -1.35
FOXN3O00409 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXN3O00409 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXN3O00409 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
FOXN3O00409 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
FOXN3O00409 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 MIR551B-201ENST00000384984 96 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 PRELID1P1-201ENST00000403549 660 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.63□□□□□ -1.35
FOXN3O00409 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXN3O00409 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXN3O00409 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.63□□□□□ -1.35
FOXN3O00409 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXN3O00409 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 LINC00328-2P-201ENST00000436585 219 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms