Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 MIR188-201ENST00000385034 86 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 AL133260.1-201ENST00000405720 405 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.79□□□□□ -1.48
PDLIM1O00151 RANP6-201ENST00000413691 644 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.79□□□□□ -1.48
PDLIM1O00151 KF459542.1-201ENST00000450908 553 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
PDLIM1O00151 COX6B1P2-201ENST00000489624 230 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AC138517.1-201ENST00000515724 568 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.79□□□□□ -1.48
PDLIM1O00151 AC092718.4-201ENST00000566639 716 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 WBP1LP11-201ENST00000586141 328 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 AC020916.2-201ENST00000591242 360 ntBASIC5.79□□□□□ -1.48
PDLIM1O00151 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM1O00151 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM1O00151 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.79□□□□□ -1.48
PDLIM1O00151 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM1O00151 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
PDLIM1O00151 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.78□□□□□ -1.48
PDLIM1O00151 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM1O00151 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDLIM1O00151 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 TRAV35-201ENST00000390462 330 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 RN7SKP281-201ENST00000410472 352 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AL445213.1-201ENST00000412589 747 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 OR13Z1P-201ENST00000416141 834 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 NPM1P22-201ENST00000427761 952 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 OR6R1P-201ENST00000431838 940 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 MED28P4-201ENST00000433137 572 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 AC023271.1-201ENST00000445936 1090 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AC004890.1-201ENST00000461005 181 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDLIM1O00151 SUMO2P4-201ENST00000504193 276 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms