Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AL138878.2-201ENST00000440581 1241 ntBASIC7.31□□□□□ -1.24
RGPD3A6NKT7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.31□□□□□ -1.24
RGPD3A6NKT7 AC112187.1-201ENST00000455837 479 ntBASIC7.31□□□□□ -1.24
RGPD3A6NKT7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.31□□□□□ -1.24
RGPD3A6NKT7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.31□□□□□ -1.24
RGPD3A6NKT7 AC021678.3-201ENST00000517893 476 ntBASIC7.31□□□□□ -1.24
RGPD3A6NKT7 AL445647.2-201ENST00000615170 130 ntBASIC7.31□□□□□ -1.24
RGPD3A6NKT7 WBP1LP8-201ENST00000617401 327 ntBASIC7.31□□□□□ -1.24
RGPD3A6NKT7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 AC092821.2-201ENST00000545710 2042 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 RN7SKP113-201ENST00000363891 295 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 LDHAP2-201ENST00000437325 985 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 TPT1P13-201ENST00000449760 499 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 RAB9BP1-201ENST00000519581 626 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 AC013488.1-201ENST00000526618 1838 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 HSPA8P14-201ENST00000552265 1805 ntBASIC7.3□□□□□ -1.24
RGPD3A6NKT7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.3□□□□□ -1.24
RGPD3A6NKT7 ZNF101P1-201ENST00000435701 1720 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 UGT2B27P-201ENST00000505092 1620 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 EPS15P1-202ENST00000459691 2071 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 RPL7P56-201ENST00000429441 717 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AC023141.8-201ENST00000442554 208 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 RPL5P22-201ENST00000480199 884 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AC024940.3-201ENST00000538551 316 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AC244502.2-201ENST00000543361 851 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 BLZF2P-201ENST00000553776 1130 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AL133406.3-201ENST00000606817 541 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 MIR7703-201ENST00000620784 77 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 AC105749.1-201ENST00000631338 2008 ntBASIC7.29□□□□□ -1.24
RGPD3A6NKT7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
RGPD3A6NKT7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 RPS18P6-201ENST00000476880 458 ntBASIC7.28□□□□□ -1.24
RGPD3A6NKT7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 BNIP3P1-201ENST00000547295 580 ntBASIC7.28□□□□□ -1.24
RGPD3A6NKT7 AL355974.3-201ENST00000617383 467 ntBASIC7.28□□□□□ -1.24
RGPD3A6NKT7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RGPD3A6NKT7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms