Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC016999.2-201ENST00000614692 556 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC124864.2-201ENST00000624736 186 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AP000356.4-201ENST00000639500 172 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AL139254.2-202ENST00000641937 1156 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC011447.7-201ENST00000624228 1590 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC020904.2-202ENST00000614660 1401 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC104162.1-201ENST00000430831 2382 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU5D-1-201ENST00000363299 116 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AL450124.1-201ENST00000376401 353 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU6-1009P-201ENST00000390996 107 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU6-244P-201ENST00000391028 104 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU6-876P-201ENST00000391295 104 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 VN2R17P-201ENST00000391712 832 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 HNRNPCP2-201ENST00000399515 881 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 ARL4AP5-201ENST00000404372 599 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SKP261-201ENST00000410948 278 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AL389915.1-201ENST00000422463 466 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 USP9YP8-201ENST00000441913 500 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL395P-201ENST00000462960 291 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL569P-201ENST00000494652 288 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC131392.1-201ENST00000506490 633 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC138866.2-201ENST00000508650 584 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 GUSBP9-201ENST00000510138 584 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 IGLVIV-59-201ENST00000520218 250 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RAB11AP2-201ENST00000545905 639 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC005479.1-201ENST00000554629 451 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC127024.5-201ENST00000580085 462 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC020914.6-201ENST00000594327 272 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC005084.1-201ENST00000605160 304 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC087623.4-201ENST00000606593 695 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC025287.2-201ENST00000621911 668 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC073348.1-201ENST00000623002 331 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AC112204.3-201ENST00000623822 332 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms