Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 RNA5SP433-201ENST00000364491 114 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 RNA5SP77-201ENST00000365394 120 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC003989.1-201ENST00000434569 565 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AL451136.1-201ENST00000435399 325 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 COL11A2P1-205ENST00000441798 676 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 OR2AF1P-201ENST00000454899 889 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 snoU109.3-201ENST00000459477 145 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 NDUFA5P5-201ENST00000468361 342 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC092824.1-201ENST00000483524 576 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC098862.1-201ENST00000504991 413 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 HSD3BP3-201ENST00000514706 994 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 TRIM51DP-201ENST00000529746 596 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC027667.1-201ENST00000545814 304 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AL359715.3-201ENST00000569267 2123 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 MIR4301-201ENST00000577203 66 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 DHFRP1-201ENST00000579682 559 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC067852.5-201ENST00000589299 310 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 uc_338.31-201ENST00000615595 186 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 OR2AH1P-202ENST00000641232 2744 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 AL591848.4-201ENST00000567832 3472 ntBASIC6.51□□□□□ -1.37
PCDHB1Q9Y5F3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AL391261.1-201ENST00000555712 1479 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 SAMM50P1-201ENST00000455403 1399 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 SNORA11B-201ENST00000408175 129 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC004854.1-201ENST00000440356 349 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 DUXAP8-207ENST00000456786 622 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 RPL23AP64-201ENST00000469465 435 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 SETP6-201ENST00000479329 568 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC131392.1-201ENST00000506490 633 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC093870.1-201ENST00000506837 213 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 SCARNA5-201ENST00000516201 276 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AL845552.1-201ENST00000556820 323 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 RN7SL208P-201ENST00000577964 296 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AC004223.2-201ENST00000590309 544 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 AL592494.3-201ENST00000609485 464 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 DUXAP10-204ENST00000612052 616 ntBASIC6.5□□□□□ -1.37
PCDHB1Q9Y5F3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms