Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 NEK2P4-201ENST00000425793 1329 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AL512310.3-201ENST00000547023 1335 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AL136984.1-201ENST00000607611 1893 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC093297.3-201ENST00000607056 2517 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 RNU6-1176P-201ENST00000390955 107 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 OR2W4P-201ENST00000406496 926 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 RN7SKP108-201ENST00000411367 328 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 HMGN1P20-201ENST00000411849 300 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 SETP9-201ENST00000423837 832 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 FAR1P1-201ENST00000427163 934 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AL451136.1-201ENST00000435399 325 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 MAPRE1P3-201ENST00000435438 796 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AL590004.3-202ENST00000445883 451 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC023194.2-201ENST00000465398 406 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC106800.3-201ENST00000511389 308 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 IGHV3-57-201ENST00000520143 280 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 CYCSP38-201ENST00000559840 322 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 MRPS21P8-201ENST00000569196 235 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AP005136.2-201ENST00000583253 1049 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC011458.1-201ENST00000604034 617 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC008833.1-201ENST00000611633 691 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC024884.1-201ENST00000620583 399 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC021422.1-201ENST00000621212 473 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC008691.1-209ENST00000642094 814 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC139426.3-201ENST00000605648 2059 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 PARP4P1-201ENST00000435945 2337 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 AC034229.2-201ENST00000566945 2508 ntBASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSX2IPQ9Y2D8 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 AC068769.1-201ENST00000474767 2426 ntBASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 AC099654.3-201ENST00000447087 1546 ntBASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 OR1F12-201ENST00000402365 945 ntBASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 RNA5SP251-201ENST00000410614 137 ntBASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 MTCO1P57-201ENST00000432182 261 ntBASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 AC242426.1-201ENST00000435270 960 ntBASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 AC018638.3-201ENST00000461273 132 ntBASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms