Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RN7SL722P-201ENST00000617780 284 ntBASIC5.9□□□□□ -1.46
CHD7Q9P2D1 RN7SL565P-201ENST00000618246 284 ntBASIC5.9□□□□□ -1.46
CHD7Q9P2D1 AC009948.5-201ENST00000624360 4406 ntBASIC5.9□□□□□ -1.46
CHD7Q9P2D1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.9□□□□□ -1.46
CHD7Q9P2D1 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD7Q9P2D1 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD7Q9P2D1 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 RN7SKP6-201ENST00000364795 319 ntBASIC5.9□□□□□ -1.47
CHD7Q9P2D1 AC068138.1-201ENST00000412635 217 ntBASIC5.9□□□□□ -1.47
CHD7Q9P2D1 COX6B1P1-201ENST00000415962 213 ntBASIC5.9□□□□□ -1.47
CHD7Q9P2D1 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 OR13K1P-201ENST00000444577 975 ntBASIC5.9□□□□□ -1.47
CHD7Q9P2D1 AL445647.2-201ENST00000615170 130 ntBASIC5.9□□□□□ -1.47
CHD7Q9P2D1 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CHD7Q9P2D1 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 SNORA70.2-201ENST00000364506 135 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AC019050.1-201ENST00000418508 492 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 MTCYBP21-201ENST00000443300 1113 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 NUTF2P7-201ENST00000453086 375 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 RN7SL354P-201ENST00000469282 294 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 RNA5SP373-201ENST00000517271 95 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 KCTD9P4-201ENST00000526766 1166 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AC244502.2-201ENST00000543361 851 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 OR4H6P-201ENST00000563771 921 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 USP9YP3-201ENST00000434481 1766 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AC110716.2-201ENST00000563865 3945 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 ZNF969P-201ENST00000510345 2341 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AC104964.2-201ENST00000562242 4641 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 COX6CP17-201ENST00000421389 185 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 OR2AM1P-201ENST00000422137 422 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AL138878.2-201ENST00000440581 1241 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 OR13C1P-201ENST00000457612 963 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 RN7SKP147-201ENST00000517154 244 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 MR1-205ENST00000434571 7479 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 PANDAR-201ENST00000629595 1506 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 IRF5P1-201ENST00000504852 2164 ntBASIC5.89□□□□□ -1.47
CHD7Q9P2D1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD7Q9P2D1 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 MGAT2P2-201ENST00000427194 797 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC132825.1-201ENST00000463573 2247 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC010132.2-201ENST00000295493 1043 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms