Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 AL137918.1-201ENST00000624542 1922 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 RN7SKP29-201ENST00000410957 272 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 BX323845.3-201ENST00000428215 527 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 DEFA9P-201ENST00000433042 285 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 AC096775.1-201ENST00000437724 448 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 AC004129.2-201ENST00000457229 287 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 AC079080.1-201ENST00000479841 822 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 AC099521.1-201ENST00000482557 334 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 GAPDHP71-201ENST00000511530 1003 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 AC078899.1-201ENST00000521432 1185 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 MFSD8-219ENST00000641228 2559 ntBASIC6.25□□□□□ -1.41
CISHQ9NSE2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CISHQ9NSE2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 OR7E25P-201ENST00000344844 931 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC092651.1-201ENST00000426110 312 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC126120.1-201ENST00000431082 470 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 BX679664.2-201ENST00000439282 283 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC015983.1-201ENST00000441577 373 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 RPL5P10-201ENST00000445207 894 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 ACA64.1-201ENST00000459171 127 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC006539.1-201ENST00000481419 501 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC006499.4-201ENST00000510947 694 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 IGLV3-30-201ENST00000524362 298 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AP000648.1-201ENST00000529682 397 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AL031601.1-201ENST00000605702 394 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 AL359742.1-201ENST00000622497 540 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 AC129915.3-201ENST00000634128 948 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.24□□□□□ -1.41
CISHQ9NSE2 FBXL21-201ENST00000297158 1305 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CISHQ9NSE2 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.24□□□□□ -1.41
CISHQ9NSE2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 EPS15P1-202ENST00000459691 2071 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CISHQ9NSE2 RN7SKP78-201ENST00000364711 318 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CISHQ9NSE2 MRPL53P1-201ENST00000414323 319 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 RPL23AP18-201ENST00000416139 468 ntBASIC6.23□□□□□ -1.41
CISHQ9NSE2 AL035660.1-201ENST00000422041 222 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms