Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 COX6B1P3-201ENST00000312310 260 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 RNA5SP273-201ENST00000362484 113 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 BX284632.2-201ENST00000421091 399 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AL512605.1-202ENST00000441919 381 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 RPL5P10-201ENST00000445207 894 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AL359955.2-201ENST00000445380 353 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 RPS23P9-201ENST00000448848 438 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC005165.2-201ENST00000466070 380 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 Vault.2-201ENST00000516519 98 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC136777.2-201ENST00000522979 358 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AP003080.1-202ENST00000526526 915 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AL356801.1-201ENST00000559320 294 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC008507.3-201ENST00000585753 472 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AC027088.4-201ENST00000611559 1947 ntBASIC6.26□□□□□ -1.41
SIX2Q9NPC8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AL158152.1-201ENST00000602652 1435 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 LYARP1-201ENST00000436977 1501 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AP004607.3-201ENST00000530354 3915 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 TTC41P-205ENST00000551270 3963 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 RN7SKP17-201ENST00000411242 351 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 NPM1P36-201ENST00000415681 835 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AK3P5-201ENST00000432033 519 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC093166.3-201ENST00000448785 303 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC009963.3-201ENST00000458090 486 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 RPL12P7-201ENST00000493832 494 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 RN7SL284P-201ENST00000498823 275 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 SCARNA18.1-201ENST00000516330 83 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC139365.2-201ENST00000517972 253 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 EIF4EP5-201ENST00000528228 640 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC006512.2-201ENST00000543250 486 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC079905.1-201ENST00000549280 475 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC007956.1-201ENST00000555623 542 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 DPPA3P2-202ENST00000557188 1219 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 HIRAP1-201ENST00000605318 787 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 MIR6793-201ENST00000612376 63 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AC245014.3-201ENST00000618589 347 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AL035661.1-201ENST00000620459 1144 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AL591926.1-201ENST00000620542 217 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 HCFC2P1-201ENST00000392864 1592 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AL355488.2-201ENST00000609909 2850 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 AL022323.4-201ENST00000623980 13120 ntBASIC6.25□□□□□ -1.41
SIX2Q9NPC8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms