Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL357153.4-201ENST00000620487 1016 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 OR9K1P-202ENST00000641111 3217 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 GUCY1B2-204ENST00000531898 1979 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC023632.6-201ENST00000624338 2177 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 MIR937-201ENST00000401271 86 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AL023284.3-201ENST00000407767 334 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 RPS14P4-201ENST00000415880 418 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 MARK2P12-201ENST00000420129 585 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 MGAT2P2-201ENST00000427194 797 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 GAPDHP20-201ENST00000444107 1007 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC136777.2-201ENST00000522979 358 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 NPIPB14P-203ENST00000532298 987 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 NANOGNBP2-201ENST00000544753 553 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC090022.1-201ENST00000546569 311 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 RN7SL371P-201ENST00000578099 267 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AL049840.5-201ENST00000602827 552 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 BUB1P1-201ENST00000603541 607 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AL357140.4-201ENST00000636827 412 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 MRRFP1-201ENST00000435941 1675 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC022613.3-201ENST00000560740 1346 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 KYNUP3-201ENST00000574386 1341 ntBASIC6.19□□□□□ -1.42
TRIM4Q9C037 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM4Q9C037 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM4Q9C037 AC091305.2-201ENST00000624049 1576 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL121768.1-201ENST00000613917 2544 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL591135.1-201ENST00000401578 5914 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 RNA5SP321-201ENST00000362722 111 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 SNORA38B-201ENST00000363524 131 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AC087752.1-201ENST00000391360 558 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 COL11A2P1-205ENST00000441798 676 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 HMGB1P7-201ENST00000450921 612 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 HLA-DPA3-207ENST00000454398 229 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 RN7SL629P-201ENST00000489622 285 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL390198.2-201ENST00000510553 222 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 SCARNA5-201ENST00000516201 276 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 SNORA74.1-201ENST00000516320 180 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms