Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 RNA5SP429-201ENST00000363688 109 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 RNU6-452P-201ENST00000384406 107 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 MTCO1P56-201ENST00000401674 224 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 RNA5SP177-201ENST00000410122 107 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 UBTFL2-201ENST00000411859 1191 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 OR5M12P-201ENST00000423388 929 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 FDPSP1-201ENST00000424976 1071 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC096632.2-201ENST00000438139 1239 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC016908.1-201ENST00000442571 1219 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC092647.3-201ENST00000443044 633 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC019080.2-201ENST00000453859 394 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC005410.1-202ENST00000460347 485 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 RPL5P12-201ENST00000477071 851 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC011037.1-201ENST00000483964 558 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC004815.1-201ENST00000484185 331 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC073610.1-201ENST00000489971 396 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 SUMO2P4-201ENST00000504193 276 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC105313.1-201ENST00000509121 353 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 HMGB1P1-201ENST00000522557 636 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC023050.2-201ENST00000544968 387 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 OR7E19P-202ENST00000589942 844 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC024085.1-201ENST00000604299 432 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 CUX2P1-201ENST00000606426 298 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 RN7SL778P-201ENST00000607160 297 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AL138478.1-201ENST00000612252 832 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 WASF5P-205ENST00000428639 1455 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AC119674.1-204ENST00000641348 1343 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AL391380.1-201ENST00000439300 1432 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 PARP4P1-201ENST00000435945 2337 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AC122713.2-201ENST00000624942 3335 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 RN7SKP63-201ENST00000363187 301 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 SNORD116-2-201ENST00000384274 95 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 RNU6-532P-201ENST00000384318 107 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 SNORD116-6-201ENST00000384711 96 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 RN7SKP131-201ENST00000410698 301 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 VTA1P1-201ENST00000414044 866 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AL365338.1-201ENST00000422282 858 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 RPSAP32-201ENST00000432681 526 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 MTCO1P52-201ENST00000433928 531 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 HMGB3P6-201ENST00000444896 598 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 OR6K5P-201ENST00000447050 945 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AL133480.2-201ENST00000456723 487 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 RPSAP24-201ENST00000461543 873 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AC135721.2-201ENST00000464237 300 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AC021205.1-201ENST00000468797 348 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AL079303.1-201ENST00000486611 463 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 PGAM4P2-201ENST00000512491 721 ntBASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.01□□□□□ -1.29
TRIM55Q9BYV6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms