Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC8.88□□□□□ -0.99
SCAPERQ9BY12 AC090510.2-201ENST00000617465 629 ntBASIC8.88□□□□□ -0.99
SCAPERQ9BY12 AC092692.1-201ENST00000623625 2595 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 HMGA1P8-201ENST00000414130 321 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 METTL15P3-201ENST00000415522 1221 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AURKAPS1-201ENST00000451805 1212 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 RPL7AP6-201ENST00000477943 801 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AC099521.1-201ENST00000482557 334 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AC021146.10-201ENST00000515628 706 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 OR5D15P-201ENST00000531671 942 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 GARSP1-201ENST00000570895 719 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 AL021368.3-201ENST00000607119 578 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 ZNF840P-201ENST00000504759 1996 ntBASIC8.87□□□□□ -0.99
SCAPERQ9BY12 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SCAPERQ9BY12 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AL662795.2-201ENST00000624252 3706 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AL159987.1-201ENST00000347911 293 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 SNORA56-201ENST00000383966 129 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 OR5W1P-201ENST00000423705 938 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AC245047.2-201ENST00000441060 530 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 PGAM1P13-201ENST00000507497 754 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AC073581.1-201ENST00000519036 575 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 GTF2IP4-201ENST00000453092 2054 ntBASIC8.86□□□□□ -0.99
SCAPERQ9BY12 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.86□□□□□ -0.99
SCAPERQ9BY12 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AC016583.1-201ENST00000624221 2431 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 HIST1H3PS1-201ENST00000404612 417 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 RPL37P18-201ENST00000411602 243 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AL133173.1-201ENST00000423458 397 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 PSMD10P3-201ENST00000437000 448 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 RPS26P41-201ENST00000450370 284 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 RPSAP50-201ENST00000481955 852 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AC072052.1-201ENST00000496556 306 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 IGHV1-14-201ENST00000523391 241 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 HIGD1AP5-201ENST00000529959 259 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 AL596275.2-208ENST00000641192 594 ntBASIC8.85□□□□□ -0.99
SCAPERQ9BY12 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCAPERQ9BY12 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 UG0898H09-202ENST00000623646 7040 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 PARP4P1-201ENST00000435945 2337 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 SLC35E1P1-201ENST00000419313 864 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms