Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC022730.1-201ENST00000473114 568 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC108734.3-201ENST00000481241 1165 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC126121.1-201ENST00000482313 553 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 RNU6-416P-201ENST00000516265 103 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC126323.4-201ENST00000566935 234 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 SIGLEC31P-201ENST00000594237 551 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 MIR6070-201ENST00000613967 103 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC067852.7-201ENST00000623270 535 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AP000676.3-201ENST00000623299 569 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC016717.3-201ENST00000624730 554 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AC103706.2-201ENST00000638080 240 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 SNORA70.8-201ENST00000384231 136 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 MIR16-1-201ENST00000385271 89 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 LYPLA1P3-201ENST00000402650 695 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 MIR1302-8-201ENST00000408342 128 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 RAC1P4-201ENST00000419413 579 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 PTP4A1P5-201ENST00000420305 455 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 EEF1GP7-201ENST00000422983 703 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 RPL7P4-203ENST00000430239 730 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 MTND1P32-201ENST00000433043 938 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 PMS2P11-201ENST00000451831 574 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 WBP1LP1-201ENST00000460451 896 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC096922.1-201ENST00000461635 651 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 VPS26AP1-201ENST00000483197 979 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 RN7SL153P-201ENST00000486501 292 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC107952.1-201ENST00000524200 376 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 OR5F2P-201ENST00000532761 941 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC022069.1-201ENST00000582910 658 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 DUXAP11-201ENST00000603858 526 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AC080013.3-201ENST00000606839 578 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 AL132796.3-201ENST00000624703 900 ntBASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRAIPQ9BWF2 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms