Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSX3Q99909 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSX3Q99909 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 RN7SKP250-201ENST00000363924 321 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 RNA5SP485-201ENST00000365053 119 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSX3Q99909 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX3Q99909 RPS26P38-201ENST00000414476 348 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX3Q99909 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX3Q99909 AL390879.1-201ENST00000439143 386 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX3Q99909 AL139156.3-201ENST00000454802 394 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 SULT1D1P-201ENST00000458020 882 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 RN7SL72P-201ENST00000460697 269 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX3Q99909 AC107015.1-201ENST00000466902 747 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 SEPT7P6-201ENST00000469999 1143 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX3Q99909 FTH1P11-201ENST00000517577 551 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 TDGP1-201ENST00000543961 1229 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX3Q99909 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 SNORD39.2-201ENST00000579995 76 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 AC245052.7-201ENST00000601161 359 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 AL078623.1-201ENST00000602702 907 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 AC011891.2-201ENST00000604949 397 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.32□□□□□ -1.56
SSX3Q99909 AC004241.2-201ENST00000614562 444 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 AC089999.3-201ENST00000622440 577 ntBASIC5.32□□□□□ -1.56
SSX3Q99909 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SSX3Q99909 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SSX3Q99909 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX3Q99909 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC006213.6-201ENST00000623722 4179 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC119674.1-202ENST00000641333 1860 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 AC011369.2-201ENST00000624423 1567 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSX3Q99909 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 MRPS6P2-201ENST00000381143 370 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 RN7SKP129-201ENST00000410288 299 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 RNA5SP115-201ENST00000411160 107 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC116036.1-201ENST00000412199 367 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms