Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
IFT140Q96RY7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.55□□□□□ -0.88
IFT140Q96RY7 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
IFT140Q96RY7 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
IFT140Q96RY7 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
IFT140Q96RY7 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
IFT140Q96RY7 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
IFT140Q96RY7 MITF-203ENST00000328528 4680 ntTSL 5 BASIC9.55□□□□□ -0.88
IFT140Q96RY7 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
IFT140Q96RY7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC9.54□□□□□ -0.88
IFT140Q96RY7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.54□□□□□ -0.88
IFT140Q96RY7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.54□□□□□ -0.88
IFT140Q96RY7 CCDC11P1-201ENST00000503137 1162 ntBASIC9.54□□□□□ -0.88
IFT140Q96RY7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.54□□□□□ -0.88
IFT140Q96RY7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 BRD9P1-201ENST00000529855 560 ntBASIC9.54□□□□□ -0.88
IFT140Q96RY7 AC126615.2-201ENST00000553003 515 ntBASIC9.54□□□□□ -0.88
IFT140Q96RY7 AC007494.1-201ENST00000562293 760 ntBASIC9.54□□□□□ -0.88
IFT140Q96RY7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 AC012618.3-205ENST00000637896 1496 ntBASIC9.54□□□□□ -0.88
IFT140Q96RY7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
IFT140Q96RY7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
IFT140Q96RY7 OFD1P10Y-201ENST00000434110 1433 ntBASIC9.54□□□□□ -0.88
IFT140Q96RY7 AC010132.2-201ENST00000295493 1043 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 NIFKP3-201ENST00000417799 865 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 OR13K1P-201ENST00000444577 975 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 TPT1P13-201ENST00000449760 499 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC234771.5-201ENST00000600161 514 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AL662795.2-201ENST00000624252 3706 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZNF101P1-201ENST00000435701 1720 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC022905.1-201ENST00000503430 3048 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC104837.2-201ENST00000427236 424 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC092324.1-201ENST00000468671 324 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 RN7SL738P-201ENST00000470264 297 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC090114.3-201ENST00000479267 829 ntBASIC9.53□□□□□ -0.88
IFT140Q96RY7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC9.53□□□□□ -0.88
IFT140Q96RY7 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
IFT140Q96RY7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.52□□□□□ -0.88
IFT140Q96RY7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
IFT140Q96RY7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
IFT140Q96RY7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
IFT140Q96RY7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
IFT140Q96RY7 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
IFT140Q96RY7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.52□□□□□ -0.88
IFT140Q96RY7 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
IFT140Q96RY7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
IFT140Q96RY7 THAP12P9-201ENST00000503971 2360 ntBASIC9.52□□□□□ -0.89
IFT140Q96RY7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 CREM-208ENST00000361599 2170 ntTSL 5 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
IFT140Q96RY7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
IFT140Q96RY7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 RNU4-4P-201ENST00000364588 130 ntBASIC9.52□□□□□ -0.89
IFT140Q96RY7 RNU4-2-201ENST00000365668 141 ntBASIC9.52□□□□□ -0.89
IFT140Q96RY7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
IFT140Q96RY7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
IFT140Q96RY7 AC004129.2-201ENST00000457229 287 ntBASIC9.52□□□□□ -0.89
IFT140Q96RY7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 MIR7641-1-201ENST00000627518 61 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms