Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 ST13P16-201ENST00000401760 781 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 TMA16P2-201ENST00000413187 601 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC106883.1-201ENST00000418805 562 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 HMGB3P5-201ENST00000428894 612 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 SNRPBP1-201ENST00000443634 282 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 MTCYBP11-201ENST00000447254 1109 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 RPS26P41-201ENST00000450370 284 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 RPL26P30-201ENST00000453533 435 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 YRDCP3-201ENST00000456507 480 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 RPL9P15-201ENST00000491096 532 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 RN7SL350P-201ENST00000492591 299 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC092349.1-201ENST00000504903 310 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC090568.1-201ENST00000509499 856 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL390198.2-201ENST00000510553 222 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AP005902.2-201ENST00000518393 307 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC104115.2-201ENST00000523026 687 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL162632.2-201ENST00000553933 399 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC233266.2-201ENST00000567067 528 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 ANP32BP1-202ENST00000568553 737 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC023762.1-201ENST00000603280 584 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL157899.1-201ENST00000604110 936 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AL049840.6-201ENST00000604583 345 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC025016.1-201ENST00000616746 682 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AP003476.1-201ENST00000623984 516 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC013437.2-201ENST00000639587 677 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 AC119674.1-213ENST00000641177 1386 ntBASIC5.92□□□□□ -1.46
SNX18Q96RF0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX18Q96RF0 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX18Q96RF0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX18Q96RF0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX18Q96RF0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX18Q96RF0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 MIR133A2-201ENST00000347538 102 ntBASIC5.91□□□□□ -1.46
SNX18Q96RF0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNX18Q96RF0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 257.1 ms