Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 OR5AZ1P-201ENST00000527448 943 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 AC013731.1-201ENST00000604340 883 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 AC009163.6-201ENST00000612367 342 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 MIR8089-201ENST00000620165 82 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 ABCA11P-202ENST00000504019 2110 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
TOPBP1Q92547 AC011379.1-201ENST00000508713 3025 ntBASIC9.59□□□□□ -0.88
TOPBP1Q92547 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 MAPK10-338ENST00000641647 3362 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 EIF2S2P3-201ENST00000428356 999 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 LDHAP2-201ENST00000437325 985 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 RN7SL352P-201ENST00000466002 277 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 RPS18P6-201ENST00000476880 458 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 SNRPCP2-201ENST00000504370 475 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 AC013701.1-201ENST00000522657 465 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 RPL10P14-201ENST00000565265 298 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 MIR4697-201ENST00000582977 78 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 SNORD91A-202ENST00000609620 191 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 COL6A4P1-202ENST00000487147 4317 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TOPBP1Q92547 LINC01616-201ENST00000561816 2280 ntBASIC9.58□□□□□ -0.88
TOPBP1Q92547 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
TOPBP1Q92547 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 RNU1-24P-201ENST00000364285 165 ntBASIC9.57□□□□□ -0.88
TOPBP1Q92547 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 AL360081.1-201ENST00000428299 555 ntBASIC9.57□□□□□ -0.88
TOPBP1Q92547 AC092106.1-201ENST00000444291 373 ntBASIC9.57□□□□□ -0.88
TOPBP1Q92547 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 RPS3AP41-201ENST00000462701 778 ntBASIC9.57□□□□□ -0.88
TOPBP1Q92547 AC090114.3-201ENST00000479267 829 ntBASIC9.57□□□□□ -0.88
TOPBP1Q92547 AC105384.2-201ENST00000508433 640 ntBASIC9.57□□□□□ -0.88
TOPBP1Q92547 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 BMPR1APS2-201ENST00000527904 1012 ntBASIC9.57□□□□□ -0.88
TOPBP1Q92547 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TOPBP1Q92547 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC9.57□□□□□ -0.88
TOPBP1Q92547 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TOPBP1Q92547 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 DSTNP5-201ENST00000427921 523 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 VDAC1P6-201ENST00000430062 855 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 AL022319.1-201ENST00000458183 1167 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 AC015864.1-201ENST00000496512 544 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 AC078878.1-201ENST00000539832 958 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOPBP1Q92547 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TOPBP1Q92547 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 AC127070.3-201ENST00000503695 3263 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 AL360271.1-201ENST00000395679 510 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 RN7SKP288-201ENST00000516227 268 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 AF230666.2-201ENST00000602328 725 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 AL022394.1-201ENST00000606979 292 ntBASIC9.56□□□□□ -0.88
TOPBP1Q92547 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC9.56□□□□□ -0.88
TOPBP1Q92547 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOPBP1Q92547 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms