Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SNORD8-201ENST00000363915 110 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 BX284632.2-201ENST00000421091 399 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AL512605.1-202ENST00000441919 381 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AL645936.1-201ENST00000441979 518 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 TRIM60P16-201ENST00000444048 694 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AL359955.2-201ENST00000445380 353 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 RPL23AP40-201ENST00000487630 390 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 MIR6809-201ENST00000612189 116 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC004477.3-201ENST00000614061 590 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 MIR6826-201ENST00000617808 98 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 CASC19-222ENST00000641321 1173 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 MTND4LP17-201ENST00000414607 293 ntBASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 ST13P12-201ENST00000508958 1094 ntBASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 AC068305.2-201ENST00000550567 1205 ntBASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 AC092121.1-201ENST00000569452 202 ntBASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 Z95114.1-201ENST00000624264 14574 ntBASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM3Q8TF72 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 RNA5SP375-201ENST00000362975 119 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 RN7SKP162-201ENST00000363605 345 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 MIR585-201ENST00000384887 94 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 RN7SKP293-201ENST00000411389 296 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 RPS15AP30-201ENST00000420976 390 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC092651.1-201ENST00000426110 312 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC099677.3-201ENST00000427081 395 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 RPL6P30-201ENST00000443382 862 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 CST12P-201ENST00000457644 362 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 FABP12P1-201ENST00000401911 322 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL132875.1-201ENST00000403623 949 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AL445466.1-201ENST00000448432 357 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC093270.2-201ENST00000486157 792 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 TRBV5-2-201ENST00000489095 273 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC083795.1-201ENST00000491760 320 ntBASIC6.09□□□□□ -1.43
SHROOM3Q8TF72 AC008629.2-201ENST00000503783 483 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms