Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AP001437.1-201ENST00000608783 456 ntBASIC5.71□□□□□ -1.5
CCDC71Q8IV32 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71Q8IV32 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC025470.1-201ENST00000510053 2032 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 RN7SKP78-201ENST00000364711 318 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AL445238.1-204ENST00000400311 463 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC094019.1-201ENST00000434678 472 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC073594.1-201ENST00000462065 364 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC026782.2-201ENST00000510845 636 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC027369.2-201ENST00000528030 440 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 LSM1P2-201ENST00000604911 322 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC026124.2-201ENST00000621847 656 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 SNX18P12-201ENST00000624821 759 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC000095.2-202ENST00000637415 154 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC093225.1-201ENST00000506867 1408 ntBASIC5.7□□□□□ -1.5
CCDC71Q8IV32 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71Q8IV32 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC138907.8-201ENST00000623981 2256 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC005522.1-201ENST00000395416 346 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RN7SKP108-201ENST00000411367 328 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AL731534.1-201ENST00000434711 269 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC009963.4-201ENST00000448535 339 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 PPIAP20-201ENST00000449839 135 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 SNRPCP3-201ENST00000474888 476 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RNA5SP400-201ENST00000517155 111 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 IGLVIV-64-201ENST00000518581 301 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RPA2P3-201ENST00000533268 770 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC125612.1-201ENST00000547580 377 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms