Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF43Q68DV7 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF43Q68DV7 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
RNF43Q68DV7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF43Q68DV7 HCG18-244ENST00000602516 2890 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 BX005019.1-201ENST00000561881 1810 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 NBPF8-201ENST00000583271 5330 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 RN7SKP174-201ENST00000363803 330 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 RN7SKP85-201ENST00000411349 318 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC091492.1-201ENST00000419844 272 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 MTCO3P1-205ENST00000422088 832 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC134879.1-201ENST00000426062 394 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC009237.4-201ENST00000441078 238 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AP000936.2-201ENST00000447151 681 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL589880.1-201ENST00000448271 287 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ST13P21-201ENST00000453250 1098 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AL358876.1-201ENST00000453364 1075 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 RPL7P45-201ENST00000455851 743 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC005410.1-202ENST00000460347 485 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 RPL6P9-201ENST00000466502 859 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 BZW1P2-201ENST00000473537 826 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 RPL10P18-201ENST00000519384 309 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 RPL41P2-201ENST00000544920 409 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC087883.1-201ENST00000551882 391 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 OR4N3P-201ENST00000559395 818 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 MIR4470-201ENST00000583453 72 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC079315.1-201ENST00000602952 623 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC005034.5-201ENST00000604219 466 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC112230.1-201ENST00000604342 547 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 AC135068.4-201ENST00000622949 925 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 OR7E161P-202ENST00000641994 1033 ntBASIC7.45□□□□□ -1.22
RNF43Q68DV7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF43Q68DV7 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RNF43Q68DV7 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC015871.3-201ENST00000618835 2261 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC011815.2-201ENST00000618230 2021 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 OR6M2P-202ENST00000641780 2063 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC004014.2-201ENST00000623718 5122 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 Y_RNA.248-201ENST00000364501 109 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms