Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 BMS1P17-202ENST00000416720 316 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 AK4P4-201ENST00000419465 646 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
GABPAQ06546 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.94□□□□□ -1.3
GABPAQ06546 AL731534.1-201ENST00000434711 269 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.94□□□□□ -1.3
GABPAQ06546 RPL38P3-201ENST00000484463 213 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.94□□□□□ -1.3
GABPAQ06546 AC008429.4-201ENST00000521201 182 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.94□□□□□ -1.3
GABPAQ06546 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.94□□□□□ -1.3
GABPAQ06546 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.94□□□□□ -1.3
GABPAQ06546 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.94□□□□□ -1.3
GABPAQ06546 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
GABPAQ06546 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.94□□□□□ -1.3
GABPAQ06546 GARSP1-201ENST00000570895 719 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.94□□□□□ -1.3
GABPAQ06546 MIR6768-201ENST00000610734 72 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.94□□□□□ -1.3
GABPAQ06546 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.94□□□□□ -1.3
GABPAQ06546 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.94□□□□□ -1.3
GABPAQ06546 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
GABPAQ06546 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
GABPAQ06546 THAP12P9-201ENST00000503971 2360 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.93□□□□□ -1.3
GABPAQ06546 AL355377.1-201ENST00000621125 1653 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.93□□□□□ -1.3
GABPAQ06546 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
GABPAQ06546 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.93□□□□□ -1.3
GABPAQ06546 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.93□□□□□ -1.3
GABPAQ06546 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.93□□□□□ -1.3
GABPAQ06546 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 AL451046.1-201ENST00000406097 534 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 RN7SKP229-201ENST00000410465 302 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.93□□□□□ -1.3
GABPAQ06546 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 AC016027.5-201ENST00000427227 210 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 DNAJC19P5-201ENST00000443295 316 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.93□□□□□ -1.3
GABPAQ06546 AC093719.1-201ENST00000480427 441 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.93□□□□□ -1.3
GABPAQ06546 LDHBP3-201ENST00000514909 822 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 SNORA81.2-201ENST00000516868 170 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.93□□□□□ -1.3
GABPAQ06546 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.93□□□□□ -1.3
GABPAQ06546 AP000894.4-201ENST00000610185 483 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 AC109309.2-201ENST00000612597 332 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 AL137246.2-201ENST00000613439 662 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.93□□□□□ -1.3
GABPAQ06546 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.93□□□□□ -1.3
GABPAQ06546 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
GABPAQ06546 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.93□□□□□ -1.3
GABPAQ06546 AC130304.1-201ENST00000622942 2385 ntBASIC6.93□□□□□ -1.3
GABPAQ06546 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.92□□□□□ -1.3
GABPAQ06546 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
GABPAQ06546 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.92□□□□□ -1.3
GABPAQ06546 U3.25-201ENST00000391209 220 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.92□□□□□ -1.3
GABPAQ06546 RPL34P3-201ENST00000421454 338 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 RPL12P16-201ENST00000431098 498 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 AL663074.2-201ENST00000440621 479 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 CUBNP2-201ENST00000443534 1139 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.92□□□□□ -1.3
GABPAQ06546 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC138866.2-201ENST00000508650 584 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC112191.2-201ENST00000522428 333 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 MIR132-201ENST00000591554 101 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.92□□□□□ -1.3
GABPAQ06546 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms