Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC110056.1-201ENST00000525759 911 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC002519.2-203ENST00000567043 837 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AL021918.2-201ENST00000613415 194 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC073488.3-201ENST00000631611 778 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 OR8A1-204ENST00000642111 1145 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS1Q01581 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 RNU1-65P-201ENST00000363919 148 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 RN7SKP187-201ENST00000365536 330 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 DNAJC19P5-201ENST00000443295 316 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 TRIM60P16-201ENST00000444048 694 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC068491.1-201ENST00000449539 1241 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 AL451063.1-201ENST00000450164 1133 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 RSU1P1-201ENST00000453416 441 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 RNA5SP473-201ENST00000516402 125 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 Vault.2-201ENST00000516519 98 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AP001357.1-201ENST00000586304 1053 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC068768.2-201ENST00000602352 343 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC093388.1-201ENST00000609166 430 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 MIR7109-201ENST00000613748 65 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 NCOA4P2-201ENST00000340589 1813 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
HMGCS1Q01581 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AC008627.1-201ENST00000517511 1704 ntBASIC5.68□□□□□ -1.5
HMGCS1Q01581 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS1Q01581 AP002512.4-202ENST00000641599 4530 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 GNL2P1-201ENST00000451274 2190 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 GCNT1P4-201ENST00000404096 329 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 RNU2-18P-201ENST00000411224 162 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AL445928.1-201ENST00000435545 222 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 RPSAP40-201ENST00000442343 891 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 RPL5P7-201ENST00000444235 813 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AL445466.1-201ENST00000448432 357 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 FRG2FP-204ENST00000453982 852 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 RPL12P39-201ENST00000455456 496 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC090058.1-201ENST00000498788 435 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AL158068.1-201ENST00000506116 616 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC084121.1-201ENST00000533882 835 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 GARSP1-201ENST00000570895 719 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 TXNP4-201ENST00000575018 310 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 MIR4502-201ENST00000580432 81 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC006115.2-201ENST00000596823 202 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC124916.2-201ENST00000604416 224 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC073389.3-201ENST00000609434 935 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms