Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 MTND2P21-201ENST00000436242 1042 ntBASIC5.92□□□□□ -1.46
RAE1P78406 GAPDHP23-201ENST00000444823 993 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 MOB1AP2-201ENST00000446060 614 ntBASIC5.92□□□□□ -1.46
RAE1P78406 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 AL035690.1-201ENST00000490892 383 ntBASIC5.92□□□□□ -1.46
RAE1P78406 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 KHDC1P1-201ENST00000511053 508 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 AC093816.1-201ENST00000515076 913 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 OSBPL9P3-201ENST00000534523 595 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 AC007494.1-201ENST00000562293 760 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AC233266.2-201ENST00000567067 528 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.92□□□□□ -1.46
RAE1P78406 AC020916.2-201ENST00000591242 360 ntBASIC5.92□□□□□ -1.46
RAE1P78406 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 AL645927.2-201ENST00000618350 349 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AL137067.2-201ENST00000621202 131 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AC089999.3-201ENST00000622440 577 ntBASIC5.92□□□□□ -1.46
RAE1P78406 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 AC006927.4-201ENST00000639187 543 ntBASIC5.92□□□□□ -1.46
RAE1P78406 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 AL033543.1-201ENST00000623440 13454 ntBASIC5.92□□□□□ -1.46
RAE1P78406 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.92□□□□□ -1.46
RAE1P78406 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RAE1P78406 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RAE1P78406 RPL11P4-201ENST00000332269 436 ntBASIC5.91□□□□□ -1.46
RAE1P78406 RNA5SP346-201ENST00000363541 121 ntBASIC5.91□□□□□ -1.46
RAE1P78406 RNA5SP485-201ENST00000365053 119 ntBASIC5.91□□□□□ -1.46
RAE1P78406 SNORA64.3-201ENST00000365647 134 ntBASIC5.91□□□□□ -1.46
RAE1P78406 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RAE1P78406 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 MTND4LP17-201ENST00000414607 293 ntBASIC5.91□□□□□ -1.46
RAE1P78406 RPS26P4-201ENST00000431743 355 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AL606490.7-201ENST00000433136 191 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC011242.1-201ENST00000433596 1158 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC094019.1-201ENST00000434678 472 ntBASIC5.91□□□□□ -1.46
RAE1P78406 RPEP4-201ENST00000437636 602 ntBASIC5.91□□□□□ -1.46
RAE1P78406 CXCR2P1-202ENST00000443392 1074 ntBASIC5.91□□□□□ -1.46
RAE1P78406 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 AC104849.1-201ENST00000462623 405 ntBASIC5.91□□□□□ -1.46
RAE1P78406 RN7SL393P-201ENST00000463588 296 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC105918.1-201ENST00000474399 838 ntBASIC5.91□□□□□ -1.46
RAE1P78406 STRADBP1-201ENST00000478954 1281 ntBASIC5.91□□□□□ -1.46
RAE1P78406 NPM1P17-201ENST00000479221 602 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC015864.1-201ENST00000496512 544 ntBASIC5.91□□□□□ -1.46
RAE1P78406 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 SNX18P24-201ENST00000505249 671 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC034244.2-201ENST00000514668 858 ntBASIC5.91□□□□□ -1.46
RAE1P78406 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 AP001804.1-201ENST00000526868 919 ntBASIC5.91□□□□□ -1.46
RAE1P78406 OR8X1P-201ENST00000534542 869 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.91□□□□□ -1.46
RAE1P78406 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.91□□□□□ -1.46
RAE1P78406 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 AC018558.5-201ENST00000565840 952 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 RNU4ATAC-201ENST00000580972 127 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms