Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 OR13C1P-202ENST00000641378 2919 ntBASIC4.96□□□□□ -1.61
LMO4P61968 AL391262.1-201ENST00000556558 1992 ntBASIC4.96□□□□□ -1.61
LMO4P61968 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LMO4P61968 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LMO4P61968 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LMO4P61968 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMO4P61968 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LMO4P61968 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.96□□□□□ -1.62
LMO4P61968 AC120036.2-201ENST00000509729 1474 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.96□□□□□ -1.62
LMO4P61968 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.96□□□□□ -1.62
LMO4P61968 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LMO4P61968 OR10R3P-201ENST00000361688 942 ntBASIC4.96□□□□□ -1.62
LMO4P61968 MIR323A-201ENST00000362199 86 ntBASIC4.96□□□□□ -1.62
LMO4P61968 SNORA51.1-201ENST00000363243 140 ntBASIC4.96□□□□□ -1.62
LMO4P61968 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LMO4P61968 AC013268.2-201ENST00000420753 337 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.96□□□□□ -1.62
LMO4P61968 BX119321.1-201ENST00000428912 797 ntBASIC4.96□□□□□ -1.62
LMO4P61968 TRIM60P13-201ENST00000432350 1283 ntBASIC4.96□□□□□ -1.62
LMO4P61968 RPL36AP39-201ENST00000445859 318 ntBASIC4.96□□□□□ -1.62
LMO4P61968 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LMO4P61968 RAB28P2-201ENST00000454299 641 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 AC112187.1-201ENST00000455837 479 ntBASIC4.96□□□□□ -1.62
LMO4P61968 RPS27AP2-201ENST00000457576 465 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AC068522.1-201ENST00000482895 345 ntBASIC4.96□□□□□ -1.62
LMO4P61968 NPM1P28-201ENST00000492269 840 ntBASIC4.96□□□□□ -1.62
LMO4P61968 RN7SL57P-201ENST00000493687 290 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AC008629.2-201ENST00000503783 483 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.96□□□□□ -1.62
LMO4P61968 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.96□□□□□ -1.62
LMO4P61968 TPM3P3-201ENST00000521343 354 ntBASIC4.96□□□□□ -1.62
LMO4P61968 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 AC027544.3-201ENST00000535082 757 ntBASIC4.96□□□□□ -1.62
LMO4P61968 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.96□□□□□ -1.62
LMO4P61968 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.96□□□□□ -1.62
LMO4P61968 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
LMO4P61968 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.96□□□□□ -1.62
LMO4P61968 OR4H6P-201ENST00000563771 921 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
LMO4P61968 OOSP1P2-201ENST00000579644 351 ntBASIC4.96□□□□□ -1.62
LMO4P61968 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.96□□□□□ -1.62
LMO4P61968 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMO4P61968 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMO4P61968 AF117829.2-201ENST00000619538 361 ntBASIC4.96□□□□□ -1.62
LMO4P61968 MIR6886-201ENST00000619864 61 ntBASIC4.96□□□□□ -1.62
LMO4P61968 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 LRRC37A16P-202ENST00000586022 3725 ntBASIC4.96□□□□□ -1.62
LMO4P61968 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.96□□□□□ -1.62
LMO4P61968 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMO4P61968 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMO4P61968 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.96□□□□□ -1.62
LMO4P61968 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMO4P61968 AL031651.1-201ENST00000615357 1438 ntBASIC4.96□□□□□ -1.62
LMO4P61968 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
LMO4P61968 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 Z93929.1-201ENST00000418200 1475 ntBASIC4.95□□□□□ -1.62
LMO4P61968 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 PDZK1P1-202ENST00000425209 1350 ntBASIC4.95□□□□□ -1.62
LMO4P61968 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LMO4P61968 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LMO4P61968 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
LMO4P61968 RNA5SP500-201ENST00000364486 119 ntBASIC4.95□□□□□ -1.62
LMO4P61968 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LMO4P61968 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 AC005522.1-201ENST00000395416 346 ntBASIC4.95□□□□□ -1.62
LMO4P61968 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.95□□□□□ -1.62
LMO4P61968 AL451046.1-201ENST00000406097 534 ntBASIC4.95□□□□□ -1.62
LMO4P61968 USP9YP19-201ENST00000412165 485 ntBASIC4.95□□□□□ -1.62
LMO4P61968 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.95□□□□□ -1.62
LMO4P61968 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.95□□□□□ -1.62
LMO4P61968 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.95□□□□□ -1.62
LMO4P61968 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.95□□□□□ -1.62
LMO4P61968 AC064862.4-201ENST00000442180 334 ntBASIC4.95□□□□□ -1.62
LMO4P61968 RPS7P3-201ENST00000443360 580 ntBASIC4.95□□□□□ -1.62
LMO4P61968 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMO4P61968 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.95□□□□□ -1.62
LMO4P61968 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.95□□□□□ -1.62
LMO4P61968 MTND2P39-201ENST00000457230 764 ntBASIC4.95□□□□□ -1.62
LMO4P61968 RN7SL352P-201ENST00000466002 277 ntBASIC4.95□□□□□ -1.62
LMO4P61968 RN7SL165P-201ENST00000477476 291 ntBASIC4.95□□□□□ -1.62
LMO4P61968 RN7SL717P-201ENST00000478343 297 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms