Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RIPK4P57078 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RIPK4P57078 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RIPK4P57078 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.77□□□□□ -1.17
RIPK4P57078 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.77□□□□□ -1.17
RIPK4P57078 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RIPK4P57078 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.76□□□□□ -1.17
RIPK4P57078 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
RIPK4P57078 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RIPK4P57078 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 AL121835.1-201ENST00000404250 354 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 RPL12P11-201ENST00000439970 501 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 AL663074.2-201ENST00000440621 479 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.76□□□□□ -1.17
RIPK4P57078 AC011476.1-201ENST00000466725 307 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 UBFD1P1-201ENST00000473259 814 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 RN7SL57P-201ENST00000493687 290 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.76□□□□□ -1.17
RIPK4P57078 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.76□□□□□ -1.17
RIPK4P57078 AC090568.1-201ENST00000509499 856 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 IGLV3-30-201ENST00000524362 298 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 OR4A6P-201ENST00000534364 970 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 AC244502.2-201ENST00000543361 851 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.76□□□□□ -1.17
RIPK4P57078 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.76□□□□□ -1.17
RIPK4P57078 AC091078.2-201ENST00000557145 559 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.76□□□□□ -1.17
RIPK4P57078 GARSP1-201ENST00000570895 719 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 MIR4310-201ENST00000582950 57 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.76□□□□□ -1.17
RIPK4P57078 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.76□□□□□ -1.17
RIPK4P57078 AP001962.1-201ENST00000624114 559 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.76□□□□□ -1.17
RIPK4P57078 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RIPK4P57078 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 AC130304.1-201ENST00000622942 2385 ntBASIC7.76□□□□□ -1.17
RIPK4P57078 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
RIPK4P57078 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RIPK4P57078 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RIPK4P57078 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RIPK4P57078 OR52B3P-201ENST00000314715 928 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 AC023490.2-201ENST00000359859 470 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RIPK4P57078 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.75□□□□□ -1.17
RIPK4P57078 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.75□□□□□ -1.17
RIPK4P57078 AL512637.1-201ENST00000439523 1231 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 AC073109.1-201ENST00000445066 978 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 AP006222.1-205ENST00000450734 457 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 AL603882.1-201ENST00000463059 681 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 PFN1P6-201ENST00000476786 399 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.75□□□□□ -1.17
RIPK4P57078 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.75□□□□□ -1.17
RIPK4P57078 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.75□□□□□ -1.17
RIPK4P57078 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.75□□□□□ -1.17
RIPK4P57078 AP005431.1-201ENST00000618479 319 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.75□□□□□ -1.17
RIPK4P57078 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RIPK4P57078 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
RIPK4P57078 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 AL731532.1-201ENST00000623972 4236 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RIPK4P57078 AC022164.1-201ENST00000568767 2673 ntBASIC7.75□□□□□ -1.17
RIPK4P57078 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RIPK4P57078 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.74□□□□□ -1.17
RIPK4P57078 PDZK1P1-202ENST00000425209 1350 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 AC114876.1-201ENST00000490962 1366 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RIPK4P57078 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RIPK4P57078 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RIPK4P57078 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
RIPK4P57078 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RIPK4P57078 AL451046.1-201ENST00000406097 534 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 MRPL53P1-201ENST00000414323 319 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.74□□□□□ -1.17
RIPK4P57078 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.74□□□□□ -1.17
RIPK4P57078 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.74□□□□□ -1.17
RIPK4P57078 RPS29P14-201ENST00000431518 171 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 AC093166.4-201ENST00000457867 318 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 AL157777.1-201ENST00000468100 304 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 RPL38P3-201ENST00000484463 213 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.74□□□□□ -1.17
RIPK4P57078 OR4A42P-201ENST00000531397 938 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RIPK4P57078 AL049779.3-201ENST00000557141 606 ntBASIC7.74□□□□□ -1.17
RIPK4P57078 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms