Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR375-201ENST00000362103 64 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 RN7SKP162-201ENST00000363605 345 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 SNORA74A-201ENST00000364089 198 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 RNA5SP132-201ENST00000364725 118 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 HMGB1P20-201ENST00000402555 677 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 SDHDP6-201ENST00000414693 480 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 AC127526.2-201ENST00000426436 775 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 PTMAP6-201ENST00000439110 327 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 CYCSP51-201ENST00000443545 318 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 EEF1B2P6-201ENST00000445713 673 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 RN7SL610P-201ENST00000463845 291 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN6P56747 RN7SL466P-201ENST00000497546 295 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC109481.1-201ENST00000509173 282 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 RNA5SP34-201ENST00000516887 130 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CLDN6P56747 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 DPPA3P2-201ENST00000553589 478 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 MIR1269B-201ENST00000580405 75 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.83□□□□□ -1.48
CLDN6P56747 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 AC137695.1-201ENST00000604126 489 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC092944.2-201ENST00000605443 889 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC079395.2-201ENST00000610982 737 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC016769.4-201ENST00000616893 535 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 MIR6730-201ENST00000622213 67 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC018445.2-201ENST00000622987 260 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
CLDN6P56747 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN6P56747 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLDN6P56747 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
CLDN6P56747 AL731556.1-201ENST00000394628 3711 ntBASIC5.83□□□□□ -1.48
CLDN6P56747 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN6P56747 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 AC010624.4-201ENST00000597606 1351 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLDN6P56747 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC126120.1-201ENST00000431082 470 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 AC073909.1-201ENST00000447112 999 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN6P56747 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN6P56747 AL122020.1-201ENST00000472287 459 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.82□□□□□ -1.48
CLDN6P56747 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 AC074087.1-201ENST00000512059 724 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.82□□□□□ -1.48
CLDN6P56747 RNA5SP116-201ENST00000516132 98 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN6P56747 AP000648.1-201ENST00000529682 397 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLDN6P56747 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC044860.2-201ENST00000561005 179 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.82□□□□□ -1.48
CLDN6P56747 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN6P56747 FO393422.1-201ENST00000603908 708 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 AL031601.1-201ENST00000605702 394 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN6P56747 AC005332.9-201ENST00000620266 2921 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 DOCK11P1-201ENST00000553480 5932 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN6P56747 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN6P56747 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 AC011455.2-201ENST00000599320 3336 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN6P56747 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN6P56747 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 AC073429.2-201ENST00000569694 1444 ntBASIC5.82□□□□□ -1.48
CLDN6P56747 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN6P56747 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms