Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.6□□□□□ -1.35
VCPP55072 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.6□□□□□ -1.35
VCPP55072 DEFA9P-201ENST00000433042 285 ntBASIC6.6□□□□□ -1.35
VCPP55072 AC023141.3-201ENST00000436698 278 ntBASIC6.6□□□□□ -1.35
VCPP55072 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.6□□□□□ -1.35
VCPP55072 H3F3BP1-201ENST00000440551 403 ntBASIC6.6□□□□□ -1.35
VCPP55072 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.6□□□□□ -1.35
VCPP55072 RN7SL799P-201ENST00000475891 298 ntBASIC6.6□□□□□ -1.35
VCPP55072 RN7SL104P-201ENST00000498686 293 ntBASIC6.6□□□□□ -1.35
VCPP55072 PRMT5P1-201ENST00000514351 598 ntBASIC6.6□□□□□ -1.35
VCPP55072 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.6□□□□□ -1.35
VCPP55072 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.6□□□□□ -1.35
VCPP55072 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.6□□□□□ -1.35
VCPP55072 AC007956.1-201ENST00000555623 542 ntBASIC6.6□□□□□ -1.35
VCPP55072 OR4H6P-201ENST00000563771 921 ntBASIC6.6□□□□□ -1.35
VCPP55072 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 AC092121.1-201ENST00000569452 202 ntBASIC6.6□□□□□ -1.35
VCPP55072 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.6□□□□□ -1.35
VCPP55072 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.6□□□□□ -1.35
VCPP55072 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 AP005431.1-201ENST00000618479 319 ntBASIC6.6□□□□□ -1.35
VCPP55072 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.6□□□□□ -1.35
VCPP55072 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 Z83820.1-201ENST00000456978 1499 ntBASIC6.6□□□□□ -1.35
VCPP55072 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
VCPP55072 AC015689.2-201ENST00000528172 1738 ntBASIC6.59□□□□□ -1.35
VCPP55072 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
VCPP55072 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.59□□□□□ -1.35
VCPP55072 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.59□□□□□ -1.35
VCPP55072 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 TMSB4XP2-201ENST00000335179 210 ntBASIC6.59□□□□□ -1.35
VCPP55072 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.59□□□□□ -1.35
VCPP55072 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 RPL23AP18-201ENST00000416139 468 ntBASIC6.59□□□□□ -1.35
VCPP55072 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.59□□□□□ -1.35
VCPP55072 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AL355433.1-201ENST00000422804 300 ntBASIC6.59□□□□□ -1.35
VCPP55072 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AL353662.1-201ENST00000439099 327 ntBASIC6.59□□□□□ -1.35
VCPP55072 AC016908.1-201ENST00000442571 1219 ntBASIC6.59□□□□□ -1.35
VCPP55072 OR13K1P-201ENST00000444577 975 ntBASIC6.59□□□□□ -1.35
VCPP55072 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 RN7SL369P-201ENST00000477138 299 ntBASIC6.59□□□□□ -1.35
VCPP55072 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 RNA5SP438-201ENST00000516561 112 ntBASIC6.59□□□□□ -1.35
VCPP55072 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
VCPP55072 GTF2IP11-201ENST00000526931 420 ntBASIC6.59□□□□□ -1.35
VCPP55072 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AC009120.3-201ENST00000563335 499 ntBASIC6.59□□□□□ -1.35
VCPP55072 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.59□□□□□ -1.35
VCPP55072 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.59□□□□□ -1.35
VCPP55072 AC018445.2-201ENST00000622987 260 ntBASIC6.59□□□□□ -1.35
VCPP55072 AC009120.7-201ENST00000623452 780 ntBASIC6.59□□□□□ -1.35
VCPP55072 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.59□□□□□ -1.35
VCPP55072 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.59□□□□□ -1.35
VCPP55072 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.59□□□□□ -1.35
VCPP55072 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
VCPP55072 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VCPP55072 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.59□□□□□ -1.35
VCPP55072 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
VCPP55072 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
VCPP55072 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
VCPP55072 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VCPP55072 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
VCPP55072 AL449283.1-201ENST00000602631 3403 ntBASIC6.58□□□□□ -1.36
VCPP55072 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VCPP55072 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VCPP55072 AC092692.1-201ENST00000623625 2595 ntBASIC6.58□□□□□ -1.36
VCPP55072 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VCPP55072 SNORD16-201ENST00000362803 99 ntBASIC6.58□□□□□ -1.36
VCPP55072 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VCPP55072 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VCPP55072 NPM1P38-201ENST00000403835 865 ntBASIC6.58□□□□□ -1.36
VCPP55072 EEF1B2P8-201ENST00000414101 671 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms