Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.18□□□□□ -1.26
NUP98P52948 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NUP98P52948 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 SNORA74A-201ENST00000364089 198 ntBASIC7.17□□□□□ -1.26
NUP98P52948 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 GAPDHP42-201ENST00000406848 981 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 METTL15P3-201ENST00000415522 1221 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AC007394.1-201ENST00000421941 531 ntBASIC7.17□□□□□ -1.26
NUP98P52948 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 OR6D1P-201ENST00000436165 939 ntBASIC7.17□□□□□ -1.26
NUP98P52948 CYCSP12-201ENST00000437729 300 ntBASIC7.17□□□□□ -1.26
NUP98P52948 CNOT7P2-201ENST00000441051 832 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 AC005297.1-201ENST00000444765 862 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AL163193.1-201ENST00000444895 788 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AC099521.1-201ENST00000482557 334 ntBASIC7.17□□□□□ -1.26
NUP98P52948 RPL32P9-201ENST00000487963 407 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.17□□□□□ -1.26
NUP98P52948 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NUP98P52948 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.17□□□□□ -1.26
NUP98P52948 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.17□□□□□ -1.26
NUP98P52948 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.17□□□□□ -1.26
NUP98P52948 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
NUP98P52948 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
NUP98P52948 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.17□□□□□ -1.26
NUP98P52948 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NUP98P52948 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.17□□□□□ -1.26
NUP98P52948 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NUP98P52948 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NUP98P52948 SPTLC1P2-201ENST00000407089 121 ntBASIC7.17□□□□□ -1.26
NUP98P52948 MIR1286-201ENST00000408112 78 ntBASIC7.17□□□□□ -1.26
NUP98P52948 RNU4-34P-201ENST00000410431 124 ntBASIC7.17□□□□□ -1.26
NUP98P52948 RNA5SP251-201ENST00000410614 137 ntBASIC7.17□□□□□ -1.26
NUP98P52948 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.17□□□□□ -1.26
NUP98P52948 AL731534.1-201ENST00000434711 269 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 RN7SL172P-201ENST00000460535 303 ntBASIC7.17□□□□□ -1.26
NUP98P52948 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 RBM22P12-201ENST00000567098 1255 ntBASIC7.17□□□□□ -1.26
NUP98P52948 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.17□□□□□ -1.26
NUP98P52948 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.17□□□□□ -1.26
NUP98P52948 AC012616.1-201ENST00000600294 197 ntBASIC7.17□□□□□ -1.26
NUP98P52948 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NUP98P52948 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.17□□□□□ -1.26
NUP98P52948 MFSD8-239ENST00000641590 2479 ntBASIC7.17□□□□□ -1.26
NUP98P52948 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
NUP98P52948 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.16□□□□□ -1.26
NUP98P52948 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
NUP98P52948 MIR133B-201ENST00000362210 119 ntBASIC7.16□□□□□ -1.26
NUP98P52948 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.16□□□□□ -1.26
NUP98P52948 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.16□□□□□ -1.26
NUP98P52948 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.16□□□□□ -1.26
NUP98P52948 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.16□□□□□ -1.26
NUP98P52948 AL603882.1-201ENST00000463059 681 ntBASIC7.16□□□□□ -1.26
NUP98P52948 RPS4XP1-201ENST00000482189 787 ntBASIC7.16□□□□□ -1.26
NUP98P52948 AC096754.1-201ENST00000508904 818 ntBASIC7.16□□□□□ -1.26
NUP98P52948 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.16□□□□□ -1.26
NUP98P52948 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.16□□□□□ -1.26
NUP98P52948 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.16□□□□□ -1.26
NUP98P52948 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.16□□□□□ -1.26
NUP98P52948 AC005229.3-201ENST00000603438 323 ntBASIC7.16□□□□□ -1.26
NUP98P52948 SUGT1P3-202ENST00000604259 383 ntBASIC7.16□□□□□ -1.26
NUP98P52948 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.16□□□□□ -1.26
NUP98P52948 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.16□□□□□ -1.26
NUP98P52948 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
NUP98P52948 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.16□□□□□ -1.26
NUP98P52948 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NUP98P52948 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 C4BPAP1-201ENST00000415474 1893 ntBASIC7.15□□□□□ -1.26
NUP98P52948 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.15□□□□□ -1.26
NUP98P52948 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.15□□□□□ -1.26
NUP98P52948 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 AL606490.1-201ENST00000452266 765 ntBASIC7.15□□□□□ -1.26
NUP98P52948 SBDSP1-204ENST00000453858 737 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms