Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CASP4P49662 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 CAP1P2-201ENST00000417455 1409 ntBASIC6.43□□□□□ -1.38
CASP4P49662 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 RNA5SP433-201ENST00000364491 114 ntBASIC6.43□□□□□ -1.38
CASP4P49662 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CASP4P49662 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.43□□□□□ -1.38
CASP4P49662 RNU2-18P-201ENST00000411224 162 ntBASIC6.43□□□□□ -1.38
CASP4P49662 RPL23AP18-201ENST00000416139 468 ntBASIC6.43□□□□□ -1.38
CASP4P49662 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.43□□□□□ -1.38
CASP4P49662 AC073410.1-201ENST00000435125 589 ntBASIC6.43□□□□□ -1.38
CASP4P49662 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.43□□□□□ -1.38
CASP4P49662 AC004129.2-201ENST00000457229 287 ntBASIC6.43□□□□□ -1.38
CASP4P49662 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.43□□□□□ -1.38
CASP4P49662 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 RNA5SP116-201ENST00000516132 98 ntBASIC6.43□□□□□ -1.38
CASP4P49662 RNA5SP438-201ENST00000516561 112 ntBASIC6.43□□□□□ -1.38
CASP4P49662 AC078899.1-201ENST00000521432 1185 ntBASIC6.43□□□□□ -1.38
CASP4P49662 IGLV3-30-201ENST00000524362 298 ntBASIC6.43□□□□□ -1.38
CASP4P49662 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.43□□□□□ -1.38
CASP4P49662 AC007346.2-201ENST00000564816 892 ntBASIC6.43□□□□□ -1.38
CASP4P49662 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.43□□□□□ -1.38
CASP4P49662 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.43□□□□□ -1.38
CASP4P49662 CASC19-238ENST00000641523 1558 ntBASIC6.43□□□□□ -1.38
CASP4P49662 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.43□□□□□ -1.38
CASP4P49662 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 MFSD8-219ENST00000641228 2559 ntBASIC6.43□□□□□ -1.38
CASP4P49662 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.43□□□□□ -1.38
CASP4P49662 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASP4P49662 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.42□□□□□ -1.38
CASP4P49662 PARP4P2-201ENST00000446672 3326 ntBASIC6.42□□□□□ -1.38
CASP4P49662 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CASP4P49662 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.42□□□□□ -1.38
CASP4P49662 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CASP4P49662 RNA5SP477-201ENST00000362639 119 ntBASIC6.42□□□□□ -1.38
CASP4P49662 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CASP4P49662 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.42□□□□□ -1.38
CASP4P49662 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
CASP4P49662 RPL34P27-201ENST00000428810 349 ntBASIC6.42□□□□□ -1.38
CASP4P49662 CFL1P4-201ENST00000451536 498 ntBASIC6.42□□□□□ -1.38
CASP4P49662 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.42□□□□□ -1.38
CASP4P49662 OSTCP1-201ENST00000455507 450 ntBASIC6.42□□□□□ -1.38
CASP4P49662 LSM3P4-201ENST00000502948 309 ntBASIC6.42□□□□□ -1.38
CASP4P49662 AC025458.1-201ENST00000506046 166 ntBASIC6.42□□□□□ -1.38
CASP4P49662 Y_RNA.667-201ENST00000516212 107 ntBASIC6.42□□□□□ -1.38
CASP4P49662 snoU109.5-201ENST00000516231 132 ntBASIC6.42□□□□□ -1.38
CASP4P49662 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.42□□□□□ -1.38
CASP4P49662 AC068305.2-201ENST00000550567 1205 ntBASIC6.42□□□□□ -1.38
CASP4P49662 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.42□□□□□ -1.38
CASP4P49662 AC007956.1-201ENST00000555623 542 ntBASIC6.42□□□□□ -1.38
CASP4P49662 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.42□□□□□ -1.38
CASP4P49662 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.42□□□□□ -1.38
CASP4P49662 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.42□□□□□ -1.38
CASP4P49662 MIR4776-2-201ENST00000580204 80 ntBASIC6.42□□□□□ -1.38
CASP4P49662 MIR4271-201ENST00000582451 67 ntBASIC6.42□□□□□ -1.38
CASP4P49662 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.42□□□□□ -1.38
CASP4P49662 AC245014.3-201ENST00000618589 347 ntBASIC6.42□□□□□ -1.38
CASP4P49662 AC025262.3-201ENST00000623666 360 ntBASIC6.42□□□□□ -1.38
CASP4P49662 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.42□□□□□ -1.38
CASP4P49662 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 AC011933.2-201ENST00000578539 2790 ntBASIC6.42□□□□□ -1.38
CASP4P49662 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.42□□□□□ -1.38
CASP4P49662 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.42□□□□□ -1.38
CASP4P49662 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CASP4P49662 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CASP4P49662 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.42□□□□□ -1.38
CASP4P49662 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASP4P49662 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CASP4P49662 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CASP4P49662 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms