Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 AP005901.4-201ENST00000577336 569 ntBASIC6.34□□□□□ -1.39
LHX1P48742 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.34□□□□□ -1.39
LHX1P48742 AC100767.2-201ENST00000604840 693 ntBASIC6.34□□□□□ -1.39
LHX1P48742 AC145423.1-201ENST00000605712 336 ntBASIC6.34□□□□□ -1.39
LHX1P48742 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.34□□□□□ -1.39
LHX1P48742 AC138627.1-204ENST00000641894 765 ntBASIC6.34□□□□□ -1.39
LHX1P48742 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.34□□□□□ -1.4
LHX1P48742 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
LHX1P48742 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.34□□□□□ -1.4
LHX1P48742 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
LHX1P48742 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.33□□□□□ -1.4
LHX1P48742 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.33□□□□□ -1.4
LHX1P48742 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 RNU1-150P-201ENST00000362491 162 ntBASIC6.33□□□□□ -1.4
LHX1P48742 RNA5SP211-201ENST00000365516 117 ntBASIC6.33□□□□□ -1.4
LHX1P48742 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 AC015977.1-201ENST00000418887 292 ntBASIC6.33□□□□□ -1.4
LHX1P48742 RPS4XP5-201ENST00000419038 768 ntBASIC6.33□□□□□ -1.4
LHX1P48742 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.33□□□□□ -1.4
LHX1P48742 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.33□□□□□ -1.4
LHX1P48742 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.33□□□□□ -1.4
LHX1P48742 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.33□□□□□ -1.4
LHX1P48742 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.33□□□□□ -1.4
LHX1P48742 AC114781.3-201ENST00000512083 142 ntBASIC6.33□□□□□ -1.4
LHX1P48742 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.33□□□□□ -1.4
LHX1P48742 RNA5SP116-201ENST00000516132 98 ntBASIC6.33□□□□□ -1.4
LHX1P48742 AC008429.4-201ENST00000521201 182 ntBASIC6.33□□□□□ -1.4
LHX1P48742 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.33□□□□□ -1.4
LHX1P48742 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.33□□□□□ -1.4
LHX1P48742 AC006530.1-201ENST00000555980 571 ntBASIC6.33□□□□□ -1.4
LHX1P48742 ZNF322P1-201ENST00000568013 1209 ntBASIC6.33□□□□□ -1.4
LHX1P48742 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 MIR132-201ENST00000591554 101 ntBASIC6.33□□□□□ -1.4
LHX1P48742 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.33□□□□□ -1.4
LHX1P48742 AC015849.6-201ENST00000605454 474 ntBASIC6.33□□□□□ -1.4
LHX1P48742 uc_338.26-201ENST00000612659 160 ntBASIC6.33□□□□□ -1.4
LHX1P48742 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LHX1P48742 SNX18P12-201ENST00000624821 759 ntBASIC6.33□□□□□ -1.4
LHX1P48742 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LHX1P48742 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.33□□□□□ -1.4
LHX1P48742 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
LHX1P48742 AL591135.1-201ENST00000401578 5914 ntBASIC6.33□□□□□ -1.4
LHX1P48742 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LHX1P48742 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
LHX1P48742 PDZK1P1-202ENST00000425209 1350 ntBASIC6.32□□□□□ -1.4
LHX1P48742 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 PARP4P2-201ENST00000446672 3326 ntBASIC6.32□□□□□ -1.4
LHX1P48742 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 AL121768.1-201ENST00000613917 2544 ntBASIC6.32□□□□□ -1.4
LHX1P48742 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
LHX1P48742 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LHX1P48742 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
LHX1P48742 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
LHX1P48742 AL096800.1-201ENST00000405326 893 ntBASIC6.32□□□□□ -1.4
LHX1P48742 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.32□□□□□ -1.4
LHX1P48742 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 RPS29P14-201ENST00000431518 171 ntBASIC6.32□□□□□ -1.4
LHX1P48742 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.32□□□□□ -1.4
LHX1P48742 PCBP2P1-201ENST00000437262 977 ntBASIC6.32□□□□□ -1.4
LHX1P48742 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.32□□□□□ -1.4
LHX1P48742 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.32□□□□□ -1.4
LHX1P48742 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.32□□□□□ -1.4
LHX1P48742 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.32□□□□□ -1.4
LHX1P48742 AC099521.1-201ENST00000482557 334 ntBASIC6.32□□□□□ -1.4
LHX1P48742 AL035690.1-201ENST00000490892 383 ntBASIC6.32□□□□□ -1.4
LHX1P48742 RN7SL57P-201ENST00000493687 290 ntBASIC6.32□□□□□ -1.4
LHX1P48742 UGT2A3P7-201ENST00000510485 734 ntBASIC6.32□□□□□ -1.4
LHX1P48742 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.32□□□□□ -1.4
LHX1P48742 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms