Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPS27P20-201ENST00000492051 246 ntBASIC6.28□□□□□ -1.4
HADHAP40939 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.28□□□□□ -1.4
HADHAP40939 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.28□□□□□ -1.4
HADHAP40939 OR4D12P-201ENST00000509361 911 ntBASIC6.28□□□□□ -1.4
HADHAP40939 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.28□□□□□ -1.4
HADHAP40939 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.28□□□□□ -1.4
HADHAP40939 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 AC008126.1-201ENST00000549019 480 ntBASIC6.28□□□□□ -1.4
HADHAP40939 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.28□□□□□ -1.4
HADHAP40939 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 NPIPB1P-202ENST00000588786 828 ntBASIC6.28□□□□□ -1.4
HADHAP40939 DYNLL1P1-201ENST00000595442 269 ntBASIC6.28□□□□□ -1.4
HADHAP40939 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.28□□□□□ -1.4
HADHAP40939 AL122023.1-201ENST00000622847 530 ntBASIC6.28□□□□□ -1.4
HADHAP40939 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 AC114876.1-201ENST00000490962 1366 ntBASIC6.28□□□□□ -1.4
HADHAP40939 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HADHAP40939 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
HADHAP40939 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
HADHAP40939 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.27□□□□□ -1.41
HADHAP40939 RNA5SP77-201ENST00000365394 120 ntBASIC6.27□□□□□ -1.41
HADHAP40939 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 AL445238.1-204ENST00000400311 463 ntBASIC6.27□□□□□ -1.41
HADHAP40939 VN1R12P-201ENST00000403778 876 ntBASIC6.27□□□□□ -1.41
HADHAP40939 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.27□□□□□ -1.41
HADHAP40939 AC112492.2-201ENST00000432774 1030 ntBASIC6.27□□□□□ -1.41
HADHAP40939 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 AC118758.1-202ENST00000454719 225 ntBASIC6.27□□□□□ -1.41
HADHAP40939 AL445687.2-201ENST00000458156 728 ntBASIC6.27□□□□□ -1.41
HADHAP40939 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.27□□□□□ -1.41
HADHAP40939 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 AC022387.2-201ENST00000604050 448 ntBASIC6.27□□□□□ -1.41
HADHAP40939 AC012368.3-201ENST00000604190 219 ntBASIC6.27□□□□□ -1.41
HADHAP40939 QTRT1P1-201ENST00000604344 1078 ntBASIC6.27□□□□□ -1.41
HADHAP40939 AC005828.7-201ENST00000607331 556 ntBASIC6.27□□□□□ -1.41
HADHAP40939 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.27□□□□□ -1.41
HADHAP40939 AC012676.3-201ENST00000614983 479 ntBASIC6.27□□□□□ -1.41
HADHAP40939 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HADHAP40939 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HADHAP40939 CASC19-238ENST00000641523 1558 ntBASIC6.27□□□□□ -1.41
HADHAP40939 AC027575.3-201ENST00000583058 2747 ntBASIC6.27□□□□□ -1.41
HADHAP40939 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HADHAP40939 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HADHAP40939 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HADHAP40939 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HADHAP40939 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.26□□□□□ -1.41
HADHAP40939 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.26□□□□□ -1.41
HADHAP40939 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.26□□□□□ -1.41
HADHAP40939 AL359091.1-201ENST00000449048 1734 ntBASIC6.26□□□□□ -1.41
HADHAP40939 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HADHAP40939 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HADHAP40939 RPL11P4-201ENST00000332269 436 ntBASIC6.26□□□□□ -1.41
HADHAP40939 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.26□□□□□ -1.41
HADHAP40939 GNG5P2-201ENST00000372054 207 ntBASIC6.26□□□□□ -1.41
HADHAP40939 RAB5CP1-201ENST00000395972 580 ntBASIC6.26□□□□□ -1.41
HADHAP40939 AL139805.1-201ENST00000407837 289 ntBASIC6.26□□□□□ -1.41
HADHAP40939 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.26□□□□□ -1.41
HADHAP40939 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.26□□□□□ -1.41
HADHAP40939 RN7SKP86-201ENST00000410454 332 ntBASIC6.26□□□□□ -1.41
HADHAP40939 RN7SKP121-201ENST00000410842 305 ntBASIC6.26□□□□□ -1.41
HADHAP40939 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.26□□□□□ -1.41
HADHAP40939 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms