Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CD40LGP29965 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40LGP29965 AC007346.2-201ENST00000564816 892 ntBASIC5.32□□□□□ -1.56
CD40LGP29965 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40LGP29965 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CD40LGP29965 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40LGP29965 AL353729.2-201ENST00000605859 1249 ntBASIC5.32□□□□□ -1.56
CD40LGP29965 AL451049.1-201ENST00000608672 497 ntBASIC5.32□□□□□ -1.56
CD40LGP29965 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40LGP29965 MIR6883-201ENST00000614952 78 ntBASIC5.32□□□□□ -1.56
CD40LGP29965 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40LGP29965 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.32□□□□□ -1.56
CD40LGP29965 SNX18P12-201ENST00000624821 759 ntBASIC5.32□□□□□ -1.56
CD40LGP29965 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40LGP29965 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CD40LGP29965 AC092701.1-201ENST00000623627 1551 ntBASIC5.32□□□□□ -1.56
CD40LGP29965 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40LGP29965 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40LGP29965 NAMPTP1-201ENST00000440465 2514 ntBASIC5.32□□□□□ -1.56
CD40LGP29965 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40LGP29965 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40LGP29965 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CD40LGP29965 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CD40LGP29965 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD40LGP29965 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD40LGP29965 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CD40LGP29965 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD40LGP29965 SNORD16-201ENST00000362803 99 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 RN7SKP130-201ENST00000364924 301 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 RNA5SP152-201ENST00000365184 110 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40LGP29965 HYALP1-201ENST00000417674 1279 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 AHCYP8-201ENST00000425108 209 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40LGP29965 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40LGP29965 AL845321.1-201ENST00000444603 348 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40LGP29965 AL354872.1-201ENST00000456361 967 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.31□□□□□ -1.56
CD40LGP29965 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.31□□□□□ -1.56
CD40LGP29965 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.31□□□□□ -1.56
CD40LGP29965 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 USP9YP2-201ENST00000504503 1000 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40LGP29965 ENPP7P11-201ENST00000505915 627 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 USP9YP1-201ENST00000513521 1002 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 MINOS1P4-201ENST00000515470 318 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 AC096661.1-201ENST00000515870 822 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 RNU6-513P-201ENST00000516104 104 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 SCARNA11.1-201ENST00000516918 132 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 TMEM97P2-201ENST00000517841 403 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40LGP29965 OR8A2P-201ENST00000528631 952 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40LGP29965 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 COX6CP7-201ENST00000597056 208 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 AC019257.2-201ENST00000605539 497 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40LGP29965 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CD40LGP29965 AC004023.1-201ENST00000561473 1744 ntBASIC5.31□□□□□ -1.56
CD40LGP29965 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40LGP29965 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CD40LGP29965 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40LGP29965 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC011933.2-201ENST00000578539 2790 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 RNA5SP321-201ENST00000362722 111 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD40LGP29965 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD40LGP29965 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD40LGP29965 LDHAP5-201ENST00000394996 622 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 AL157884.1-201ENST00000424561 454 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 AC009784.1-201ENST00000426484 460 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 CRIP1P1-201ENST00000427567 185 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 RPL36AP55-201ENST00000454114 305 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms