Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COL4A5P29400 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 CDY5P-201ENST00000411487 1580 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 CDY9P-201ENST00000451397 1580 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 AL391261.1-201ENST00000555712 1479 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 THAP12P9-201ENST00000503971 2360 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC6.87□□□□□ -1.31
COL4A5P29400 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COL4A5P29400 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 RPL26P29-201ENST00000415623 438 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 AC073850.1-201ENST00000449243 255 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 BZW1P1-201ENST00000454901 1240 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 RN7SL352P-201ENST00000466002 277 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 IGLV3-24-201ENST00000517477 197 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 FAM25E-202ENST00000608562 189 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
COL4A5P29400 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
COL4A5P29400 AC112255.1-201ENST00000624070 2493 ntBASIC6.86□□□□□ -1.31
COL4A5P29400 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.86□□□□□ -1.31
COL4A5P29400 RN7SKP104-201ENST00000362605 328 ntBASIC6.86□□□□□ -1.31
COL4A5P29400 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 RN7SKP279-201ENST00000411383 298 ntBASIC6.86□□□□□ -1.31
COL4A5P29400 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.86□□□□□ -1.31
COL4A5P29400 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.86□□□□□ -1.31
COL4A5P29400 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.86□□□□□ -1.31
COL4A5P29400 AL603882.1-201ENST00000463059 681 ntBASIC6.86□□□□□ -1.31
COL4A5P29400 RN7SL97P-201ENST00000486780 299 ntBASIC6.86□□□□□ -1.31
COL4A5P29400 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.86□□□□□ -1.31
COL4A5P29400 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.86□□□□□ -1.31
COL4A5P29400 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL4A5P29400 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.86□□□□□ -1.31
COL4A5P29400 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 ZNF658B-201ENST00000602828 3408 ntBASIC6.86□□□□□ -1.31
COL4A5P29400 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.86□□□□□ -1.31
COL4A5P29400 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.86□□□□□ -1.31
COL4A5P29400 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL4A5P29400 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.86□□□□□ -1.31
COL4A5P29400 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.85□□□□□ -1.31
COL4A5P29400 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.85□□□□□ -1.31
COL4A5P29400 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.85□□□□□ -1.31
COL4A5P29400 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
COL4A5P29400 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.85□□□□□ -1.31
COL4A5P29400 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL4A5P29400 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 USP9YP3-201ENST00000434481 1766 ntBASIC6.85□□□□□ -1.31
COL4A5P29400 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COL4A5P29400 DUTP5-201ENST00000406790 469 ntBASIC6.85□□□□□ -1.31
COL4A5P29400 DNAJB5P1-201ENST00000454004 806 ntBASIC6.85□□□□□ -1.31
COL4A5P29400 AL389915.2-201ENST00000454576 441 ntBASIC6.85□□□□□ -1.31
COL4A5P29400 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.85□□□□□ -1.31
COL4A5P29400 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.85□□□□□ -1.31
COL4A5P29400 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.85□□□□□ -1.31
COL4A5P29400 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.85□□□□□ -1.31
COL4A5P29400 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.85□□□□□ -1.31
COL4A5P29400 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 AC131971.1-201ENST00000332881 1482 ntBASIC6.85□□□□□ -1.31
COL4A5P29400 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.85□□□□□ -1.31
COL4A5P29400 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A5P29400 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.84□□□□□ -1.31
COL4A5P29400 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms